RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 DHRS7BQ6IAN0 325 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-220ENST00000464800 ZNF730Q6ZMV8 503 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 Q6ZSV7 163 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 FAM122BQ7Z309 247 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 ZSCAN4Q8NAM6 433 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-220ENST00000464800 GJC3Q8NFK1 279 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 OR2T12Q8NG77 320 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 SIRPDQ9H106 197 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 FN3KRPQ9HA64 309 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 MRGBPQ9NV56 204 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 SNX13Q9Y5W8 968 aa12.09□□□□□ -0.47
MCF2L-220ENST00000464800 C5orf63A6NC05 138 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 FAM220BPB1ANY3 271 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 LGALS8O00214 317 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 CDC42EP2O14613 210 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 ADAM20O43506 726 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 IFNW1P05000 195 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 CSF1P09603 554 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 ZNF26P17031 533 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-220ENST00000464800 SDHAP31040 664 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 OR8B8Q15620 311 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 MPPED2Q15777 294 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 KCNMB1Q16558 191 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 SFRP4Q6FHJ7 346 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-220ENST00000464800 HDXQ7Z353 690 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-220ENST00000464800 RNF113BQ8IZP6 322 aaKnown RBP12.08□□□□□ -0.48
MCF2L-220ENST00000464800 BOLLQ8N9W6 283 aaKnown RBP12.08□□□□□ -0.48
MCF2L-220ENST00000464800 ACOT11Q8WXI4 607 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-220ENST00000464800 LZICQ8WZA0 190 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 C16orf95Q9H693 158 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 NMNAT1Q9HAN9 279 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-220ENST00000464800 SMURF1Q9HCE7 757 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 TRIM36Q9NQ86 728 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 SAR1AQ9NR31 198 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 GID8Q9NWU2 228 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 RNF7Q9UBF6 113 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 LHFPL6Q9Y693 200 aa12.08□□□□□ -0.48
MCF2L-220ENST00000464800 BTBD17A6NE02 478 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 J3KTA2 159 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 FFAR1O14842 300 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 CENPAP49450 140 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 HOXA4Q00056 320 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-220ENST00000464800 SF3A3Q12874 501 aaKnown RBP eCLIP12.07□□□□□ -0.484e-6■■■■□ 22.2
MCF2L-220ENST00000464800 GK2Q14410 553 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-220ENST00000464800 MAPRE2Q15555 327 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 OR8G1Q15617 311 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 GPR139Q6DWJ6 353 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 PGM2L1Q6PCE3 622 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 COLCA1Q6ZS62 124 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 TMPRSS11FQ6ZWK6 438 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 MBOAT2Q6ZWT7 520 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 VTCN1Q7Z7D3 282 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 ADCK1Q86TW2 530 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 SPRYD4Q8WW59 207 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-220ENST00000464800 NUAK2Q9H093 628 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 VSX1Q9NZR4 365 aaPredicted RBP12.07□□□□□ -0.48
MCF2L-220ENST00000464800 RPS6KA6Q9UK32 745 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 NOP16Q9Y3C1 178 aaKnown RBP12.07□□□□□ -0.48
MCF2L-220ENST00000464800 FAM96BQ9Y3D0 163 aa12.07□□□□□ -0.48
MCF2L-220ENST00000464800 A0A087WUU8 490 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 TRAV38-1A0A0B4J264 116 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 SOCS2O14508 198 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 IMPA2O14732 288 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 NDUFA2O43678 99 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 NDUFB2O95178 105 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 ARF6P62330 175 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 EGR3Q06889 387 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 COX10Q12887 443 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 MALLQ13021 153 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 MEP1BQ16820 701 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 BEAN1Q3B7T3 259 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 DNM1P34Q6PK57 102 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 CORO6Q6QEF8 472 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 TBPL2Q6SJ96 375 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 RRM2BQ7LG56 351 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 PDZD9Q8IXQ8 264 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 ADAT1Q9BUB4 502 aaKnown RBP12.06□□□□□ -0.48
MCF2L-220ENST00000464800 SLC22A4Q9H015 551 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 VIPAS39Q9H9C1 493 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 GMPR2Q9P2T1 348 aaKnown RBP12.06□□□□□ -0.48
MCF2L-220ENST00000464800 VPREB3Q9UKI3 123 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 TMEM5Q9Y2B1 443 aa12.06□□□□□ -0.48
MCF2L-220ENST00000464800 PLXNB1O43157 2135 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 A0A1B0GVI7 797 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 OOEPA6NGQ2 149 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 G3V4G9 280 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 PIN1P1O15428 100 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 ECDO95905 644 aaPredicted RBP12.05□□□□□ -0.48
MCF2L-220ENST00000464800 ACSM4P0C7M7 580 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 TROVE2P10155 538 aaKnown RBP eCLIP12.05□□□□□ -0.48
MCF2L-220ENST00000464800 CA6P23280 308 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 CRABP1P29762 137 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 C11orf91Q3C1V1 193 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 KRTAP27-1Q3LI81 207 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 PTCHD4Q6ZW05 846 aa12.05□□□□□ -0.48
MCF2L-220ENST00000464800 PGAP1Q75T13 922 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms