RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ZNF217O75362 1048 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 DAOP14920 347 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 POLR2GP62487 172 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 FUT7Q11130 342 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 TOMM20Q15388 145 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 RPL7L1Q6DKI1 246 aaKnown RBP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 DCXRQ7Z4W1 244 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 ISOC2Q96AB3 205 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 MMABQ96EY8 250 aaPredicted RBP11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 OR8D2Q9GZM6 311 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 G6PC2Q9NQR9 355 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 GSN-AS1Q9NRJ2 163 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 SLC2A8Q9NY64 477 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 OR52A1Q9UKL2 312 aa11.24□□□□□ -0.61
CLCNKA-204ENST00000464764 IGKV1D-43A0A0B4J1Z2 117 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 METTL21EPA6NDL7 271 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 C17orf105B2RV13 164 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 H0YIG0 161 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 FABP1P07148 127 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 VSIG8P0DPA2 414 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 KIR2DL1P43626 348 aaPredicted RBP11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 RPL27P61353 136 aaKnown RBP11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 ROM1Q03395 351 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 EBPQ15125 230 aaKnown RBP11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 KCTD18Q6PI47 426 aaPredicted RBP11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 ARHGEF39Q8N4T4 335 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 TMEM230Q96A57 120 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 AKR1E2Q96JD6 320 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 RSRP1Q9BUV0 290 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 C5orf66Q9H5L9 145 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 NIT2Q9NQR4 276 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 A0A1W2PP11 408 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 ZNF44P15621 663 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 ADH6P28332 368 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 DRAM2Q6UX65 266 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 NAA40Q86UY6 237 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 LYPD6Q86Y78 171 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 ZDHHC22Q8N966 263 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 OR4K15Q8NH41 348 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 ASB17Q8WXJ9 295 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 ADAT3Q96EY9 351 aaPredicted RBP11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 SOX7Q9BT81 388 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 ZNF304Q9HCX3 659 aa11.23□□□□□ -0.61
CLCNKA-204ENST00000464764 MBTPS2O43462 519 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 FKTNO75072 461 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 MED6O75586 246 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 RAB32Q13637 225 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 ANKRD55Q3KP44 614 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 DHRS11Q6UWP2 260 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 CLEC18BQ6UXF7 455 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 CLEC9AQ6UXN8 241 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 MISPQ8IVT2 679 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 ZNF440Q8IYI8 595 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 OR13C9Q8NGT0 318 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 OR52N5Q8NH56 324 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 MAFIPQ8WZ33 124 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 NECAB3Q96P71 396 aaPredicted RBP11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 C20orf24Q9BUV8 137 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 ADAM19Q9H013 955 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 SLC2A4RGQ9NR83 387 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 PRAMEF26H0Y7S4 382 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 SDCBPO00560 298 aaPredicted RBP11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 HTR3BO95264 441 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 S100A10P60903 97 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 S100A12P80511 92 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 CCINQ13939 588 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 C1orf100Q5SVJ3 147 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 LINC00469Q8N7U9 141 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 TMEM104Q8NE00 496 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 ZNF519Q8TB69 540 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 TWSG1Q9GZX9 223 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 BANF2Q9H503 90 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 RAB22AQ9UL26 194 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 R4GMQ9 66 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 TTLL8A6PVC2 850 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 CLDN4O14493 209 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 SRSF10O75494 262 aaKnown RBP11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 GUSBP08236 651 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 HOXB5P09067 269 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 FSTP19883 344 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 CPT2P23786 658 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 PPM1FP49593 454 aaPredicted RBP11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 CAV2P51636 162 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 OR2A2Q6IF42 318 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 YAF2Q8IY57 180 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 SECTM1Q8WVN6 248 aa11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 RPH3AQ9Y2J0 694 aaPredicted RBP11.22□□□□□ -0.61
CLCNKA-204ENST00000464764 TRBV6-7A0A0A0MS04 114 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 A0A0A6YYD4 124 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 A0A1W2PQF6 199 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 SOCS1O15524 211 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 GNRH1P01148 92 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 ANOS1P23352 680 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 ABCD3P28288 659 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 Q6ZSR6 202 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 PGAP1Q75T13 922 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 HOGA1Q86XE5 327 aa11.21□□□□□ -0.61
CLCNKA-204ENST00000464764 ANGPTL5Q86XS5 388 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms