RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 IKZF1Q13422 519 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 LGALSLQ3ZCW2 172 aaPredicted RBP8.18□□□□□ -1.1
HPS4-208ENST00000464362 OPN5Q6U736 354 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 SEZ6L2Q6UXD5 910 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 LINC00696Q6ZRV3 163 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 VASH2Q86V25 355 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 NKAIN3Q8N8D7 197 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 C14orf79Q96F83 325 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 CNTNAP3Q9BZ76 1288 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 GAREM1Q9H706 876 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 CALHM2Q9HA72 323 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 CHST11Q9NPF2 352 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 ZNF230Q9UIE0 474 aaPredicted RBP8.18□□□□□ -1.1
HPS4-208ENST00000464362 DOPEY2Q9Y3R5 2298 aa8.18□□□□□ -1.1
HPS4-208ENST00000464362 H3BMH7 237 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ARPC3O15145 178 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ZNF205O95201 554 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ZNF728P0DKX0 622 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ABCD3P28288 659 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 FOLR3P41439 243 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 AFF3P51826 1226 aaKnown RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 PCK2Q16822 640 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 BRICD5Q6PL45 260 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 TMEM200AQ86VY9 491 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 MKXQ8IYA7 352 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 SLC38A6Q8IZM9 456 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 C11orf40Q8WZ69 217 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ZNF75AQ96N20 296 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ZNF2Q9BSG1 426 aaPredicted RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 NKX6-2Q9C056 277 aaPredicted RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 NXF2Q9GZY0 626 aaKnown RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 LAT2Q9GZY6 243 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 EVA1AQ9H8M9 152 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 PURGQ9UJV8 347 aaKnown RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 RGS13O14921 159 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 OIP5O43482 229 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 TK1P04183 234 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ANKRD34CP0C6C1 535 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 DHRS2Q13268 280 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 HLXQ14774 488 aaPredicted RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 ZNF813Q6ZN06 617 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ACOT7LQ6ZUV0 252 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 C20orf196Q8IYI0 205 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 TSPAN32Q96QS1 320 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 PBOV1Q9GZY1 135 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 FAM86C1Q9NVL1 165 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 FRRS1LQ9P0K9 344 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 LUZP4Q9P127 313 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 B4GALT7Q9UBV7 327 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 MTFP1Q9UDX5 166 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ACACAQ13085 2346 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 OR6C65A6NJZ3 312 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 RER1O15258 196 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 CTSBP07858 339 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 EFNB2P52799 333 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ATP1B3P54709 279 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 OR2B8PP59922 312 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 NANOS3P60323 173 aaKnown RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 TMEM71Q6P5X7 295 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 FAM199XQ6PEV8 388 aaPredicted RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 FAM122BQ7Z309 247 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 NPEPL1Q8NDH3 523 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 OR10Z1Q8NGY1 313 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 OR51H1Q8NH63 302 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 LURAP1Q96LR2 239 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 SLC19A3Q9BZV2 496 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 CHST6Q9GZX3 395 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ZNF629Q9UEG4 869 aaPredicted RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 DOCK8Q8NF50 2099 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 MEX3AA1L020 520 aaKnown RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 SNRPGP15A8MWD9 76 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 LEUTXA8MZ59 168 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 MRPL33O75394 65 aaKnown RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 CTAG2O75638 210 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ADRA2AP08913 450 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ASCL1P50553 236 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 HTRA4P83105 476 aaPredicted RBP8.17□□□□□ -1.1
HPS4-208ENST00000464362 EGR3Q06889 387 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 CLLU1Q5K131 121 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 TAF9BQ9HBM6 251 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 ZNF286AQ9HBT8 521 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 C1orf123Q9NWV4 160 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 CES1P1Q9UKY3 287 aa8.17□□□□□ -1.1
HPS4-208ENST00000464362 DOCK7Q96N67 2140 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 C17orf51A8MQB3 221 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 DCTN6O00399 190 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 KCNAB3O43448 404 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 ATG12O94817 140 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 BPNT1O95861 308 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 ABHD16AO95870 558 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 DUSP1P28562 367 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 LIMS1P48059 325 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 CENPFP49454 3210 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 ZNF121P58317 390 aaPredicted RBP8.16□□□□□ -1.1
HPS4-208ENST00000464362 S100A12P80511 92 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 PPP1R1AQ13522 171 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 CDONQ4KMG0 1287 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 PDZD11Q5EBL8 140 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 UBALD1Q8TB05 177 aa8.16□□□□□ -1.1
HPS4-208ENST00000464362 ANKRD9Q96BM1 317 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms