RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CDH10Q9Y6N8 788 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 NBEAL1Q6ZS30 2694 aa15.83■□□□□ 0.12
SF3A1-205ENST00000463818 TMEM89A2RUT3 159 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 CEACAM18A8MTB9 384 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 GASTP01350 101 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 HLA-DPB1P04440 258 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF823P16415 610 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 CFPP27918 469 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 PMELP40967 661 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 TPTEP56180 551 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 MALLQ13021 153 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 GK2Q14410 553 aaPredicted RBP15.82■□□□□ 0.12
SF3A1-205ENST00000463818 ESCO2Q56NI9 601 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 ARHGAP24Q8N264 748 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 LINC00471Q8N535 108 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 OR52L1Q8NGH7 329 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 ZNRF4Q8WWF5 429 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 NSL1Q96IY1 281 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 MAP6Q96JE9 813 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 BTBD10Q9BSF8 475 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 TRIM15Q9C019 465 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 ACTR3BQ9P1U1 418 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 KCNG2Q9UJ96 466 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 INSIG2Q9Y5U4 225 aa15.82■□□□□ 0.12
SF3A1-205ENST00000463818 A0A1B0GWJ7 208 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 TVP23AA6NH52 213 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 A8MXK9 166 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 B2RBV5 119 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 BHLHE40O14503 412 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 ATP6V1B2P21281 511 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 PPP1R8Q12972 351 aaKnown RBP15.81■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF362Q5T0B9 420 aaPredicted RBP15.81■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF770Q6IQ21 691 aaPredicted RBP15.81■□□□□ 0.12
SF3A1-205ENST00000463818 RPL13AP3Q6NVV1 102 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 RASSF6Q6ZTQ3 369 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 ZDHHC22Q8N966 263 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 PROKR2Q8NFJ6 384 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 OR4C15Q8NGM1 316 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 PLA2G12AQ9BZM1 189 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 C1orf21Q9H246 121 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 ESM1Q9NQ30 184 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 IL20Q9NYY1 176 aa15.81■□□□□ 0.12
SF3A1-205ENST00000463818 LRRC30A6NM36 301 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 CCNB2O95067 398 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 CPT2P23786 658 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 RPS27P42677 84 aaKnown RBP15.8■□□□□ 0.12
SF3A1-205ENST00000463818 COMPP49747 757 aaPredicted RBP15.8■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF181Q2M3W8 571 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 ARMCX4Q5H9R4 360 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 FAM201AQ5SY85 155 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 PGAP1Q75T13 922 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 TRPM8Q7Z2W7 1104 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 OR51L1Q8NGJ5 315 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 OR8D4Q8NGM9 314 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 OR10S1Q8NGN2 331 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 OR2T4Q8NH00 348 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 TMEM246Q9BRR3 403 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 MRI1Q9BV20 369 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 NTN4Q9HB63 628 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 MIOXQ9UGB7 285 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 OR5V1Q9UGF6 321 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 NUP50Q9UKX7 468 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 LRCH1Q9Y2L9 728 aa15.8■□□□□ 0.12
SF3A1-205ENST00000463818 TANC2Q9HCD6 1990 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 M0R135 149 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 CD80P33681 288 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 MAGEA2P43356 314 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 PAX8Q06710 450 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 MAB21L1Q13394 359 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 KLF17Q5JT82 389 aaPredicted RBP15.79■□□□□ 0.12
SF3A1-205ENST00000463818 LYPD4Q6UWN0 246 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 KLBQ86Z14 1044 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 C1orf87Q8N0U7 546 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 SLC37A3Q8NCC5 494 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 SPRYD4Q8WW59 207 aaPredicted RBP15.79■□□□□ 0.12
SF3A1-205ENST00000463818 SPTSSAQ969W0 71 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF799Q96GE5 643 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 TSSK6Q9BXA6 273 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF69Q9UC07 566 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 PPIAL4AQ9Y536 164 aa15.79■□□□□ 0.12
SF3A1-205ENST00000463818 TCRBV5S2A0A599 114 aa15.78■□□□□ 0.12
SF3A1-205ENST00000463818 FSTL3O95633 263 aa15.78■□□□□ 0.12
SF3A1-205ENST00000463818 RPS2P15880 293 aaKnown RBP15.78■□□□□ 0.12
SF3A1-205ENST00000463818 GATA4P43694 442 aa15.78■□□□□ 0.12
SF3A1-205ENST00000463818 UBA52P62987 128 aaKnown RBP15.78■□□□□ 0.12
SF3A1-205ENST00000463818 RBMS3Q6XE24 437 aaKnown RBP15.78■□□□□ 0.12
SF3A1-205ENST00000463818 MRPL21Q7Z2W9 205 aaKnown RBP15.78■□□□□ 0.12
SF3A1-205ENST00000463818 BCL6BQ8N143 479 aaPredicted RBP15.78■□□□□ 0.12
SF3A1-205ENST00000463818 LNX2Q8N448 690 aa15.78■□□□□ 0.12
SF3A1-205ENST00000463818 CELF2-AS1Q8N7Q2 184 aa15.78■□□□□ 0.12
SF3A1-205ENST00000463818 SIGLECL1Q8N7X8 197 aa15.78■□□□□ 0.12
SF3A1-205ENST00000463818 AQP11Q8NBQ7 271 aa15.78■□□□□ 0.12
SF3A1-205ENST00000463818 OR9Q1Q8NGQ5 310 aa15.78■□□□□ 0.12
SF3A1-205ENST00000463818 ERGIC1Q969X5 290 aa15.78■□□□□ 0.12
SF3A1-205ENST00000463818 SSBP3Q9BWW4 388 aaPredicted RBP15.78■□□□□ 0.12
SF3A1-205ENST00000463818 DDX28Q9NUL7 540 aaKnown RBP15.78■□□□□ 0.12
SF3A1-205ENST00000463818 TBC1D23Q9NUY8 699 aa15.78■□□□□ 0.12
SF3A1-205ENST00000463818 CD300LBA8K4G0 201 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 PSKH1P11801 424 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 IRF2P14316 349 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms