RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 CPN1P15169 458 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 ZNF823P16415 610 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 FAUP35544 74 aaKnown RBP8.77□□□□□ -1.01
PTPRD-207ENST00000463477 PTGDSP41222 190 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 RPS27P42677 84 aaKnown RBP8.77□□□□□ -1.01
PTPRD-207ENST00000463477 HSF1Q00613 529 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 PMP22Q01453 160 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 RAB11BQ15907 218 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 RNASE12Q5GAN4 147 aaKnown RBP8.77□□□□□ -1.01
PTPRD-207ENST00000463477 GLT8D1Q68CQ7 371 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 ZNF704Q6ZNC4 412 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-207ENST00000463477 SLC35D2Q76EJ3 337 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 RHOUQ7L0Q8 258 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 HDDC2Q7Z4H3 204 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 GLB1L2Q8IW92 636 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 SPICQ8N5J4 248 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 PAQR8Q8TEZ7 354 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 ASB5Q8WWX0 329 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 PTX4Q96A99 478 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 SPACA9Q96E40 222 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-207ENST00000463477 GPR137Q96N19 417 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 TMEM165Q9HC07 324 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-207ENST00000463477 CKLFQ9UBR5 152 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 SCP2D1Q9UJQ7 156 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 ING1Q9UK53 422 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-207ENST00000463477 HHLA2Q9UM44 414 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 RPH3AQ9Y2J0 694 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-207ENST00000463477 COA3Q9Y2R0 106 aaPredicted RBP8.77□□□□□ -1.01
PTPRD-207ENST00000463477 WIF1Q9Y5W5 379 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 EML6Q6ZMW3 1958 aa8.77□□□□□ -1.01
PTPRD-207ENST00000463477 LOC390937A0A1W2PQ73 354 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 CIB4A0PJX0 185 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 SNRPGP15A8MWD9 76 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 GMDSO60547 372 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 ICMTO60725 284 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 RBBP9O75884 186 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 ALX3O95076 343 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 NDUFB6O95139 128 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 CSF1P09603 554 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 UBCP0CG48 685 aaKnown RBP8.76□□□□□ -1.01
PTPRD-207ENST00000463477 HLA-DOBP13765 273 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 IFNGR1P15260 489 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 ADH6P28332 368 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 MMP16P51512 607 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 ZNF41P51814 821 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-207ENST00000463477 SRSF1Q07955 248 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTPRD-207ENST00000463477 FOXF1Q12946 379 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 SNTA1Q13424 505 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 MELKQ14680 651 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 OR7A5Q15622 319 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 ETFDHQ16134 617 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 PLPPR5Q32ZL2 321 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 RNFT1Q5M7Z0 435 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 C1orf100Q5SVJ3 147 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 TMEM244Q5VVB8 128 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 TMEM225Q6GV28 225 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 ASPHD2Q6ICH7 369 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 GLDNQ6ZMI3 551 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-207ENST00000463477 SERPINA12Q8IW75 414 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 NKAIN3Q8N8D7 197 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 OR6M1Q8NGM8 313 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 RNF133Q8WVZ7 376 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 SLC25A28Q96A46 364 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 PHF21AQ96BD5 680 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 FAM3DQ96BQ1 224 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 ARL5BQ96KC2 179 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 G6PC2Q9NQR9 355 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 SERINC1Q9NRX5 453 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 DEPPQ9NTK1 212 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 PPP4R1LQ9P1A2 415 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 KLK11Q9UBX7 282 aa8.76□□□□□ -1.01
PTPRD-207ENST00000463477 ZNF107Q9UII5 783 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-207ENST00000463477 CHCHD2Q9Y6H1 151 aaPredicted RBP8.76□□□□□ -1.01
PTPRD-207ENST00000463477 FLNBO75369 2602 aaKnown RBP8.76□□□□□ -1.01
PTPRD-207ENST00000463477 LOC102725191A0A1B0GVB3 256 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 WISP2O76076 250 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 P04436 131 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 MELTFP08582 738 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 ITGA5P08648 1049 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 CCL3P10147 92 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 GABRA1P14867 456 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 IL11P20809 199 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 POU3F4P49335 361 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 MEOX1P50221 254 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 MFGE8Q08431 387 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-207ENST00000463477 CAMK2DQ13557 499 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 C3orf33Q6P1S2 294 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 ARSKQ6UWY0 536 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 DNAAF1Q8NEP3 725 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 OR2M7Q8NG81 312 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 OR1J4Q8NGS1 313 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 PRR7Q8TB68 274 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 SLC25A43Q8WUT9 341 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-207ENST00000463477 FOXRED1Q96CU9 486 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-207ENST00000463477 FAM173AQ9BQD7 235 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 MRPL13Q9BYD1 178 aaKnown RBP8.75□□□□□ -1.01
PTPRD-207ENST00000463477 SCPEP1Q9HB40 452 aa8.75□□□□□ -1.01
PTPRD-207ENST00000463477 GPN1Q9HCN4 374 aaPredicted RBP8.75□□□□□ -1.01
PTPRD-207ENST00000463477 KLRF1Q9NZS2 232 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms