RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 LRRC75AQ8NAA5 344 aa6.29□□□□□ -1.4
SMC3-202ENST00000462899 SMYD1Q8NB12 490 aa6.29□□□□□ -1.4
SMC3-202ENST00000462899 PAPD5Q8NDF8 572 aaKnown RBP6.29□□□□□ -1.4
SMC3-202ENST00000462899 OR4S1Q8NGB4 309 aa6.29□□□□□ -1.4
SMC3-202ENST00000462899 ECSITQ9BQ95 431 aa6.29□□□□□ -1.4
SMC3-202ENST00000462899 PPA2Q9H2U2 334 aa6.29□□□□□ -1.4
SMC3-202ENST00000462899 SERTAD4Q9NUC0 356 aa6.29□□□□□ -1.4
SMC3-202ENST00000462899 VAPAQ9P0L0 249 aa6.29□□□□□ -1.4
SMC3-202ENST00000462899 ERVK-18Q9QC07 812 aa6.29□□□□□ -1.4
SMC3-202ENST00000462899 KAAG1Q9UBP8 84 aa6.29□□□□□ -1.4
SMC3-202ENST00000462899 ATPIF1Q9UII2 106 aa6.29□□□□□ -1.4
SMC3-202ENST00000462899 RPUSD1Q9UJJ7 312 aaKnown RBP6.29□□□□□ -1.4
SMC3-202ENST00000462899 TLDC2A0PJX2 215 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 C12orf71A8MTZ7 269 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 LGALS8O00214 317 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 HDAC3O15379 428 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 SGCEO43556 437 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 SERPINB7O75635 380 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 HLA-DPB1P04440 258 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 HIST1H2ABP04908 130 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 DBHP09172 617 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 CD28P10747 220 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 IGLL1P15814 213 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 FUT1P19526 365 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 RGS6P49758 472 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 DLX1P56177 255 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 RPL27P61353 136 aaKnown RBP6.28□□□□□ -1.4
SMC3-202ENST00000462899 EGFEM1PQ0D2K5 195 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 SCRN3Q0VDG4 424 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 KRTAP27-1Q3LI81 207 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 CCDC92Q53HC0 331 aaPredicted RBP6.28□□□□□ -1.4
SMC3-202ENST00000462899 PRAMEF6Q5VXH4 476 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 COLCA1Q6ZS62 124 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 BTN2A1Q7KYR7 527 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 HIST3H2AQ7L7L0 130 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 NDUFA11Q86Y39 141 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 FAM90A1Q86YD7 464 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 FUNDC1Q8IVP5 155 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 NKAIN4Q8IVV8 208 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 SLC30A8Q8IWU4 369 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 Q8N2B8 174 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 SPERTQ8NA61 448 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 BEND2Q8NDZ0 799 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 FNDC8Q8TC99 324 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 HIST1H2ACQ93077 130 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 RASD2Q96D21 266 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 ZNF582Q96NG8 517 aaPredicted RBP6.28□□□□□ -1.4
SMC3-202ENST00000462899 EMC7Q9NPA0 242 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 PTTG3PQ9NZH4 202 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 MAB21L2Q9Y586 359 aa6.28□□□□□ -1.4
SMC3-202ENST00000462899 DSCAML1Q8TD84 2053 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 A0A1B0GW55 424 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 A0A1W2PPL8 197 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 BTBD17A6NE02 478 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 ANKRD61A6NGH8 418 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 OOEPA6NGQ2 149 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 H3BUX3 64 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 DVL1O14640 695 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 NPFFO15130 113 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 ADAM20O43506 726 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 NDUFA2O43678 99 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 CHST1O43916 411 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 SNNO75324 88 aaPredicted RBP6.27□□□□□ -1.41
SMC3-202ENST00000462899 ECDO95905 644 aaPredicted RBP6.27□□□□□ -1.41
SMC3-202ENST00000462899 LHBP01229 141 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 DUX4L2P0CJ85 424 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 DUX4L3P0CJ86 424 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 DUX4L4P0CJ87 422 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 DUX4L5P0CJ88 424 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 DUX4L6P0CJ89 424 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 DUX4L7P0CJ90 424 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 FPR3P25089 353 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 SAA4P35542 130 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 RBM34P42696 430 aaKnown RBP6.27□□□□□ -1.41
SMC3-202ENST00000462899 HIST1H3AP68431 136 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 PRB3Q04118 309 aaPredicted RBP6.27□□□□□ -1.41
SMC3-202ENST00000462899 KLRD1Q13241 179 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 AQP6Q13520 282 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 MPP2Q14168 576 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 KCNJ8Q15842 424 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 RSPO1Q2MKA7 263 aaPredicted RBP6.27□□□□□ -1.41
SMC3-202ENST00000462899 NSUN5P1Q3KNT7 163 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 PAGE3Q5JUK9 113 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 HIST2H3PS2Q5TEC6 136 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 TEX36Q5VZQ5 186 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 SFRP4Q6FHJ7 346 aaPredicted RBP6.27□□□□□ -1.41
SMC3-202ENST00000462899 HCP5Q6MZN7 132 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 DUX4L9Q6RFH8 374 aaPredicted RBP6.27□□□□□ -1.41
SMC3-202ENST00000462899 HIST2H3AQ71DI3 136 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 GCSAMQ8N6F7 178 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 BHLHE23Q8NDY6 225 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 OR4F17Q8NGA8 305 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 C8orf46Q8TAG6 207 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 TMEM255BQ8WV15 326 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 C17orf50Q8WW18 174 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 SGTBQ96EQ0 304 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 OR4F4Q96R69 305 aa6.27□□□□□ -1.41
SMC3-202ENST00000462899 CPPED1Q9BRF8 314 aaPredicted RBP6.27□□□□□ -1.41
SMC3-202ENST00000462899 MMADHCQ9H3L0 296 aaPredicted RBP6.27□□□□□ -1.41
SMC3-202ENST00000462899 CNTD2Q9H8S5 307 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms