RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	CLN8	Q9UBY8	286 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	CAPN7	Q9Y6W3	813 aa		9.26	□□□□□ -0.93
PTPN7-204	ENST00000462815	CENPVL3	A0A0U1RRI6	287 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	ELOVL7	A1L3X0	281 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	CLPSL1	A2RUU4	121 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	XKRY	O14609	159 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	KHDRBS3	O75525	346 aa	Known RBP	9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	PPP1R3D	O95685	299 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	ACSM4	P0C7M7	580 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	COX4I1	P13073	169 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	PRDX6	P30041	224 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	RPL4	P36578	427 aa	Known RBP	9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	OMP	P47874	163 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	PROK1	P58294	105 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	GK2	Q14410	553 aa	Predicted RBP	9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	MPPED2	Q15777	294 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	C8orf82	Q6P1X6	216 aa	Predicted RBP	9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	ZNF730	Q6ZMV8	503 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	CFAP77	Q6ZQR2	320 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	OR4F5	Q8NH21	305 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	RP9	Q8TA86	221 aa	Known RBP	9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	FAM46A	Q96IP4	442 aa	Known RBP	9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	NSL1	Q96IY1	281 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	TSSK2	Q96PF2	358 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	HDHD2	Q9H0R4	259 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	SIRPD	Q9H106	197 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	MMP27	Q9H306	513 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	ANKRD19P	Q9H560	264 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	BEX1	Q9HBH7	125 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	SMURF1	Q9HCE7	757 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	TMCC3	Q9ULS5	477 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	POMT1	Q9Y6A1	747 aa		9.25	□□□□□ -0.93
PTPN7-204	ENST00000462815	LOC100653049	A0A140TA62	436 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	ZNF879	B4DU55	563 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	EBAG9	O00559	213 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	ENSA	O43768	121 aa	Known RBP	9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	RRP9	O43818	475 aa	Known RBP	9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	FAM20B	O75063	409 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	KRT34	O76011	436 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	CLPX	O76031	633 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	NDUFB2	O95178	105 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	FPR3	P25089	353 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	RPL15	P61313	204 aa	Known RBP	9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	BNIP1	Q12981	228 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	SEC23B	Q15437	767 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	GPR157	Q5UAW9	335 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	PRAMEF6	Q5VXH4	476 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	GPR139	Q6DWJ6	353 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	SLC18B1	Q6NT16	456 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	CORO6	Q6QEF8	472 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	NLRC3	Q7RTR2	1065 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	ADCK1	Q86TW2	530 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	NAA40	Q86UY6	237 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	SLC15A3	Q8IY34	581 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	C1orf87	Q8N0U7	546 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	GJC3	Q8NFK1	279 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	SLC26A10	Q8NG04	563 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	OR5L1	Q8NGL2	311 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	LINC01006	Q8NI28	216 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	ERGIC1	Q969X5	290 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	HSH2D	Q96JZ2	352 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	RBM4B	Q9BQ04	359 aa	Known RBP	9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	TNFRSF19	Q9NS68	423 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	TMEM100	Q9NV29	134 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815	TAGLN3	Q9UI15	199 aa		9.24	□□□□□ -0.93
PTPN7-204	ENST00000462815		A0A1W2PRQ8	180 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	C5orf63	A6NC05	138 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	LRRC30	A6NM36	301 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	P2RY10	O00398	339 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	NME4	O00746	187 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	SOCS2	O14508	198 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	GGT2	P36268	569 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	NPY4R	P50391	375 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	DGCR6	Q14129	220 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	MAPRE2	Q15555	327 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	IFI44L	Q53G44	452 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	BRICD5	Q6PL45	260 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	C17orf107	Q6ZR85	190 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	LDLRAD3	Q86YD5	345 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	OR6V1	Q8N148	313 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	LZIC	Q8WZA0	190 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	ZDHHC16	Q969W1	377 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	CMTM5	Q96DZ9	223 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	RSRC1	Q96IZ7	334 aa	Known RBP	9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	FAM71F1	Q96KD3	344 aa	Predicted RBP	9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	DHRS1	Q96LJ7	313 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	PCGF1	Q9BSM1	259 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	B9D1	Q9UPM9	204 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	TMEM5	Q9Y2B1	443 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	IER3IP1	Q9Y5U9	82 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	ENPP4	Q9Y6X5	453 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	RYR3	Q15413	4870 aa		9.23	□□□□□ -0.93
PTPN7-204	ENST00000462815	TRBV4-1	A0A0J9YWV2	114 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	CXCR6	O00574	342 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	GPR137B	O60478	399 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	TSPAN15	O95858	294 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	IGHV4-59	P01825	116 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	PSKH1	P11801	424 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	IFNA8	P32881	189 aa		9.22	□□□□□ -0.93
PTPN7-204	ENST00000462815	IER3	P46695	156 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms