RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PATE4P0C8F1 98 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 CLUP10909 449 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 ANPEPP15144 967 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 ZNF23P17027 643 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 ZNF3P17036 446 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 TUBG1P23258 451 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 IGFBP5P24593 272 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 TTKP33981 857 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 POLR2IP36954 125 aaKnown RBP4.92□□□□□ -1.62
VPS36-202ENST00000462289 WNT5AP41221 380 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 ZNF83P51522 516 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 NANOS3P60323 173 aaKnown RBP4.92□□□□□ -1.62
VPS36-202ENST00000462289 ISL1P61371 349 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 PCBD1P61457 104 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 SNRPGP62308 76 aaKnown RBP4.92□□□□□ -1.62
VPS36-202ENST00000462289 TUBA1BP68363 451 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 TUBA4AP68366 448 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 IL1RL1Q01638 556 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 TMED1Q13445 227 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 ADIPOQQ15848 244 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 PABPC1L2AQ5JQF8 200 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 TMEM255AQ5JRV8 349 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 ZNF684Q5T5D7 378 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 NXNL2Q5VZ03 156 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 LEG1Q6P5S2 330 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 PRSS57Q6UWY2 283 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 Q6ZSR3 168 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 TUBA1AQ71U36 451 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 SLC16A14Q7RTX9 510 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 EGFL6Q8IUX8 553 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 CBR4Q8N4T8 237 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 ATG16L2Q8NAA4 619 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 CYB561A3Q8NBI2 242 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 RNF133Q8WVZ7 376 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 TRUB1Q8WWH5 349 aaKnown RBP4.92□□□□□ -1.62
VPS36-202ENST00000462289 HTRA1Q92743 480 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 NEUROG1Q92886 237 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 GCDHQ92947 438 aaPredicted RBP4.92□□□□□ -1.62
VPS36-202ENST00000462289 PIK3IP1Q96FE7 263 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 ZC3HAV1LQ96H79 300 aaKnown RBP4.92□□□□□ -1.62
VPS36-202ENST00000462289 C16orf92Q96LL3 132 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 DCLRE1CQ96SD1 692 aaKnown RBP4.92□□□□□ -1.62
VPS36-202ENST00000462289 COQ7Q99807 217 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 DHRS9Q9BPW9 319 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 C9orf16Q9BUW7 83 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 HDHD2Q9H0R4 259 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 SEMA6AQ9H2E6 1030 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 PLK3Q9H4B4 646 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 DCLRE1BQ9H816 532 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 ZNF556Q9HAH1 456 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 RPRD1BQ9NQG5 326 aaKnown RBP4.92□□□□□ -1.62
VPS36-202ENST00000462289 TUBG2Q9NRH3 451 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 CA10Q9NS85 328 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 KRT84Q9NSB2 600 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 TBCCD1Q9NVR7 557 aa4.92□□□□□ -1.62
VPS36-202ENST00000462289 MRPS18AQ9NVS2 196 aaKnown RBP4.92□□□□□ -1.62
VPS36-202ENST00000462289 A0A096LNT2 108 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 RIIAD1A6NNX1 92 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 RER1O15258 196 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 SGCEO43556 437 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 SMPD2O60906 423 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 PTHP01270 115 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 IFNGP01579 166 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 IGLV3-1P01715 115 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 CRYAAP02489 173 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 RAF1P04049 648 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 CDH2P19022 906 aaPredicted RBP4.91□□□□□ -1.62
VPS36-202ENST00000462289 ALOX5APP20292 161 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 ANOS1P23352 680 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 STOMP27105 288 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 APOBEC3AP31941 199 aaPredicted RBP4.91□□□□□ -1.62
VPS36-202ENST00000462289 DCTDP32321 178 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 OPRL1P41146 370 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 IDH3GP51553 393 aaPredicted RBP4.91□□□□□ -1.62
VPS36-202ENST00000462289 ADARB1P78563 741 aaKnown RBP4.91□□□□□ -1.62
VPS36-202ENST00000462289 COL10A1Q03692 680 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 SCRN3Q0VDG4 424 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 FOXD4Q12950 439 aaPredicted RBP4.91□□□□□ -1.62
VPS36-202ENST00000462289 KEAP1Q14145 624 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 RAB39AQ14964 217 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 RAB35Q15286 201 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 MBNL2Q5VZF2 373 aaKnown RBP4.91□□□□□ -1.62
VPS36-202ENST00000462289 TMEM236Q5W0B7 351 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 ZNF774Q6NX45 483 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 TMEM53Q6P2H8 277 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 CFAP77Q6ZQR2 320 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 JAZF1Q86VZ6 243 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 CPOQ8IVL8 374 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 ZNF101Q8IZC7 436 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 SLC30A7Q8NEW0 376 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 BBS1Q8NFJ9 593 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 GJC3Q8NFK1 279 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 OR8J1Q8NGP2 316 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 RHOXF1Q8NHV9 184 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 OTOSQ8NHW6 89 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 TMEM163Q8TC26 289 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 NSMAFQ92636 917 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 AKAP1Q92667 903 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS36-202ENST00000462289 NRGNQ92686 78 aa4.91□□□□□ -1.62
VPS36-202ENST00000462289 ITFG2Q969R8 447 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms