RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ATP6V1B2P21281 511 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 FPR2P25090 351 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 OTX1P32242 354 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-207ENST00000461798 GATA4P43694 442 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 TPTEP56180 551 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 LCN2P80188 198 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 PAX2Q02962 417 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 TRAP1Q12931 704 aaKnown RBP7.69□□□□□ -1.18
BRCA1-207ENST00000461798 TRIM25Q14258 630 aaKnown RBP7.69□□□□□ -1.18
BRCA1-207ENST00000461798 GK3PQ14409 553 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 GK2Q14410 553 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-207ENST00000461798 PCK2Q16822 640 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 TEX30Q5JUR7 227 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 SLC35F1Q5T1Q4 408 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 LCN8Q6JVE9 175 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-207ENST00000461798 LINC00346Q8IVM7 164 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 OR5AS1Q8N127 324 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 LNX2Q8N448 690 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 FITM2Q8N6M3 262 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 SDR9C7Q8NEX9 313 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 OR2AJ1Q8NGZ0 328 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 OR2T4Q8NH00 348 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 DVL3Q92997 716 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-207ENST00000461798 ERGIC1Q969X5 290 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 NSL1Q96IY1 281 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 MAP6Q96JE9 813 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 CCT8L2Q96SF2 557 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 ATF6BQ99941 703 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 BTBD10Q9BSF8 475 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 SUCNR1Q9BXA5 334 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 HCAR1Q9BXC0 346 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 NMNAT2Q9BZQ4 307 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 EGLN3Q9H6Z9 239 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 MMP26Q9NRE1 261 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 DDX28Q9NUL7 540 aaKnown RBP7.69□□□□□ -1.18
BRCA1-207ENST00000461798 TMEM100Q9NV29 134 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 INSIG2Q9Y5U4 225 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 WNK2Q9Y3S1 2297 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 ANK2Q01484 3957 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 TMEM89A2RUT3 159 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 F5H5K5 113 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 H0YL77 283 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 TRIM77I1YAP6 450 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 CCNB2O95067 398 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 PTBP3O95758 552 aaKnown RBP7.68□□□□□ -1.18
BRCA1-207ENST00000461798 HLA-DQA2P01906 255 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 LCATP04180 440 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 PPIAL4GP0DN37 164 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF823P16415 610 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 PMELP40967 661 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 SLC25A1P53007 311 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 PAX8Q06710 450 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 DBPQ10586 325 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-207ENST00000461798 MALLQ13021 153 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF154Q13106 437 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 HNRNPA0Q13151 305 aaKnown RBP7.68□□□□□ -1.18
BRCA1-207ENST00000461798 MAB21L1Q13394 359 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 MICAQ29983 383 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 CLEC12AQ5QGZ9 265 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 CD300LDQ6UXZ3 194 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 CYP2R1Q6VVX0 501 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 NAA40Q86UY6 237 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 DHFR2Q86XF0 187 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 SVOPQ8N4V2 548 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 SLC37A3Q8NCC5 494 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 OR9Q2Q8NGE9 314 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 OR52L1Q8NGH7 329 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 OR8D4Q8NGM9 314 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 OR10S1Q8NGN2 331 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 Q8TCH9 128 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 ZNRF4Q8WWF5 429 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 SPTSSAQ969W0 71 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 DACT3Q96B18 629 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-207ENST00000461798 SLCO4A1Q96BD0 722 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 RBM4Q9BWF3 364 aaKnown RBP7.68□□□□□ -1.18
BRCA1-207ENST00000461798 DGCR6LQ9BY27 220 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 PLA2G12AQ9BZM1 189 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 SLC22A4Q9H015 551 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 MIOXQ9UGB7 285 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 BAIAP2Q9UQB8 552 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 LRCH1Q9Y2L9 728 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 NBEAL1Q6ZS30 2694 aa7.68□□□□□ -1.18
BRCA1-207ENST00000461798 LRRC30A6NM36 301 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 CEACAM18A8MTB9 384 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 F5H5P2 479 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 M0R135 149 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 T-ENOLP0DO92 83 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 PYCR1P32322 319 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 CD80P33681 288 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 RBMXP38159 391 aaKnown RBP7.67□□□□□ -1.18
BRCA1-207ENST00000461798 CD200P41217 278 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 BLVRAP53004 296 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 RAD23AP54725 363 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 SEC61A1P61619 476 aaKnown RBP7.67□□□□□ -1.18
BRCA1-207ENST00000461798 MXRA7P84157 204 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 MS4A2Q01362 244 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF404Q494X3 552 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 ESCO2Q56NI9 601 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 KLF17Q5JT82 389 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms