RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 OR10S1Q8NGN2 331 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 OR51F2Q8NH61 342 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 OTULINQ96BN8 352 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 THBS2P35442 1172 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 SLC6A9P48067 706 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 GK2Q14410 553 aaPredicted RBP19.45■□□□□ 0.7
PTPN4-208ENST00000460289 SPRNQ5BIV9 151 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 LINC01590Q5TEZ4 76 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 SHQ1Q6PI26 577 aaKnown RBP19.45■□□□□ 0.7
PTPN4-208ENST00000460289 DRAM2Q6UX65 266 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 PGAP1Q75T13 922 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 DNAJC9Q8WXX5 260 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 TMEM186Q96B77 213 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 SLAMF6Q96DU3 332 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 OR2V2Q96R30 315 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 SLC30A2Q9BRI3 323 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 COPS4Q9BT78 406 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 TMEM106BQ9NUM4 274 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 TMEM100Q9NV29 134 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 PPP1R3CQ9UQK1 317 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 NPTNQ9Y639 398 aa19.45■□□□□ 0.7
PTPN4-208ENST00000460289 FAM183AA6NL82 134 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 GLCEO94923 617 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 OTX1P32242 354 aaPredicted RBP19.44■□□□□ 0.7
PTPN4-208ENST00000460289 SLC15A1P46059 708 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 CDK5Q00535 292 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 IL17RELQ6ZVW7 336 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 ZNF283Q8N7M2 679 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 ITLN1Q8WWA0 313 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 KCNJ15Q99712 375 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 GAL3ST1Q99999 423 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 MED20Q9H944 212 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 NTN4Q9HB63 628 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 CENPMQ9NSP4 180 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 HIF1ANQ9NWT6 349 aa19.44■□□□□ 0.7
PTPN4-208ENST00000460289 ISPDA4D126 451 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 ZNF878C9JN71 531 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 PRR23D1E9PI22 279 aaPredicted RBP19.43■□□□□ 0.7
PTPN4-208ENST00000460289 IFNL4K9M1U5 179 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 TIPRLO75663 272 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 PRR23D2P0DMB1 279 aaPredicted RBP19.43■□□□□ 0.7
PTPN4-208ENST00000460289 GSTT1P30711 240 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 SRP9P49458 86 aaKnown RBP19.43■□□□□ 0.7
PTPN4-208ENST00000460289 BHLHE23Q8NDY6 225 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 ST7LQ8TDW4 575 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 UTP4Q969X6 686 aaKnown RBP19.43■□□□□ 0.7
PTPN4-208ENST00000460289 INTS14Q96SY0 518 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 OR51V1Q9H2C8 321 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 LPAR2Q9HBW0 351 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 KIF17Q9P2E2 1029 aa19.43■□□□□ 0.7
PTPN4-208ENST00000460289 TRAV20A0A0B4J274 112 aa19.42■□□□□ 0.7
PTPN4-208ENST00000460289 IGHV2-5P01817 119 aa19.42■□□□□ 0.7
PTPN4-208ENST00000460289 PSKH1P11801 424 aa19.42■□□□□ 0.7
PTPN4-208ENST00000460289 GRB2P62993 217 aaKnown RBP19.42■□□□□ 0.7
PTPN4-208ENST00000460289 EIF2B1Q14232 305 aaKnown RBP19.42■□□□□ 0.7
PTPN4-208ENST00000460289 SHFQ7M4L6 423 aa19.42■□□□□ 0.7
PTPN4-208ENST00000460289 MRPL21Q7Z2W9 205 aaKnown RBP19.42■□□□□ 0.7
PTPN4-208ENST00000460289 DPY19L4Q7Z388 723 aa19.42■□□□□ 0.7
PTPN4-208ENST00000460289 ERI1Q8IV48 349 aaKnown RBP19.42■□□□□ 0.7
PTPN4-208ENST00000460289 SPRYD4Q8WW59 207 aaPredicted RBP19.42■□□□□ 0.7
PTPN4-208ENST00000460289 PLEKHA8Q96JA3 519 aa19.42■□□□□ 0.7
PTPN4-208ENST00000460289 MARCH7Q9H992 704 aa19.42■□□□□ 0.7
PTPN4-208ENST00000460289 GCM1Q9NP62 436 aa19.42■□□□□ 0.7
PTPN4-208ENST00000460289 SBK2P0C263 348 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 SRP14P37108 136 aaKnown RBP19.41■□□□□ 0.7
PTPN4-208ENST00000460289 PRKXP51817 358 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 C1orf146Q5VVC0 180 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 PLBD1Q6P4A8 553 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 RHOUQ7L0Q8 258 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 OR10AD1Q8NGE0 317 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 OR6N2Q8NGY6 317 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 OR5K1Q8NHB7 308 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 MEGF10Q96KG7 1140 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 MDFIQ99750 246 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 SLC22A4Q9H015 551 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 TOR3AQ9H497 397 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 PAPOLBQ9NRJ5 636 aaKnown RBP19.41■□□□□ 0.7
PTPN4-208ENST00000460289 ATRQ13535 2644 aa19.41■□□□□ 0.7
PTPN4-208ENST00000460289 A0A1B0GWJ7 208 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 H0YL77 283 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 PRODHO43272 600 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 IGHV2-70P01814 119 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 APOC1P02654 83 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 SNAI3Q3KNW1 292 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 SPICQ8N5J4 248 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 REPIN1Q9BWE0 567 aaKnown RBP19.4■□□□□ 0.7
PTPN4-208ENST00000460289 OPA3Q9H6K4 179 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 SP140LQ9H930 580 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 SLC25A19Q9HC21 320 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 UBAP1Q9NZ09 502 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 PCDHB10Q9UN67 800 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 NOP16Q9Y3C1 178 aaKnown RBP19.4■□□□□ 0.7
PTPN4-208ENST00000460289 AP4S1Q9Y587 144 aa19.4■□□□□ 0.7
PTPN4-208ENST00000460289 SVEP1Q4LDE5 3571 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 MLNRO43193 412 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 PLPP2O43688 288 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 FASP25445 335 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 HSD11B1P28845 292 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 CRISP1P54107 249 aa19.39■□□□□ 0.69
PTPN4-208ENST00000460289 RAD23AP54725 363 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms