RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 PGA3P0DJD8 388 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 PTHLHP12272 177 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF43P17038 809 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 NAT1P18440 290 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 CTSSP25774 331 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 EPHA8P29322 1005 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 CX3CR1P49238 355 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 PRKXP51817 358 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 TAS2R46P59540 309 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 EIF5AP63241 154 aaKnown RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 CXADRP78310 365 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 MYBPHQ13203 477 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 TRA2AQ13595 282 aaKnown RBP eCLIP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 IL11RAQ14626 422 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 SURF2Q15527 256 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 ETFDHQ16134 617 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 CSRP2Q16527 193 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 PRAMEF17Q5VTA0 474 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 AWAT2Q6E213 333 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 RGS7BPQ6MZT1 257 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 C11orf87Q6NUJ2 197 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 OPN5Q6U736 354 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 UQCC3Q6UW78 93 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 ACOT7LQ6ZUV0 252 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 TMED4Q7Z7H5 227 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 NAA40Q86UY6 237 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 FJX1Q86VR8 437 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 PPP1R3BQ86XI6 285 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 LINC00346Q8IVM7 164 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 STPG2Q8N412 459 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 SLC25A45Q8N413 288 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 DEFB119Q8N690 84 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 INO80EQ8NBZ0 244 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 CHST4Q8NCG5 386 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 OR4D10Q8NGI6 311 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 OR51A2Q8NGJ7 313 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 PP6455Q8WZ26 134 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 CLDN23Q96B33 292 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 FGGYQ96C11 551 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 ARL5BQ96KC2 179 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 NECAB3Q96P71 396 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 NUDT22Q9BRQ3 303 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 NAA11Q9BSU3 229 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 DEFB126Q9BYW3 111 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 CNTD2Q9H8S5 307 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 SLC22A11Q9NSA0 550 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 TMA7Q9Y2S6 64 aaKnown RBP7.87□□□□□ -1.15
HDAC3-202ENST00000459727 SPEF1Q9Y4P9 236 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 CPAMD8Q8IZJ3 1885 aa7.87□□□□□ -1.15
HDAC3-202ENST00000459727 A0A0U1RQV5 110 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 OR14I1A6ND48 311 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 TMEM235A6NFC5 223 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 DHRS7CA6NNS2 312 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 CEACAM18A8MTB9 384 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 A8MXK9 166 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 D6RAR5 112 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 TEX46H3BTG2 121 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 GP1BAP07359 652 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 HLA-DOBP13765 273 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF17P17021 662 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 IGFBP4P22692 258 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 ZBTB25P24278 435 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 MPGP29372 298 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 HOXA6P31267 233 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 THBS4P35443 961 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 CASRP41180 1078 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 ALDH3B1P43353 468 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 CXCL12P48061 93 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 STARP49675 285 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 EFNA3P52797 238 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 CSNK2A1P68400 391 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-202ENST00000459727 IL13RA1P78552 427 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 QRFPP83859 136 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 SORDQ00796 357 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 FMODQ06828 376 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 ECH1Q13011 328 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 PLA2G7Q13093 441 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 HIST3H3Q16695 136 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 SCGB2B2Q4G0G5 96 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 SLC25A47Q6Q0C1 308 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 NHLRC1Q6VVB1 395 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 ZNF101Q8IZC7 436 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 GALNT16Q8N428 558 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 FADS6Q8N9I5 356 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 ACBD4Q8NC06 268 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 OR2M3Q8NG83 312 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 OR4D6Q8NGJ1 314 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 OR1J2Q8NGS2 313 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 COQ8AQ8NI60 647 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 OR6C1Q96RD1 312 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 KLHDC3Q9BQ90 382 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 TMEM59Q9BXS4 323 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 TINAGL1Q9GZM7 467 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-202ENST00000459727 CDCP1Q9H5V8 836 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 NARFLQ9H6Q4 476 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 MED29Q9NX70 200 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 B3GAT1Q9P2W7 334 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 FBXL2Q9UKC9 423 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 KLK13Q9UKR3 277 aa7.86□□□□□ -1.15
HDAC3-202ENST00000459727 TNFSF18Q9UNG2 199 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms