RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 PCGF1Q9BSM1 259 aa8.65□□□□□ -1.02
HDLBP-227ENST00000458564 NUAK2Q9H093 628 aa8.65□□□□□ -1.02
HDLBP-227ENST00000458564 ACOXLQ9NUZ1 547 aa8.65□□□□□ -1.02
HDLBP-227ENST00000458564 GID8Q9NWU2 228 aa8.65□□□□□ -1.02
HDLBP-227ENST00000458564 CTSZQ9UBR2 303 aa8.65□□□□□ -1.02
HDLBP-227ENST00000458564 TMCC3Q9ULS5 477 aa8.65□□□□□ -1.02
HDLBP-227ENST00000458564 AP3M1Q9Y2T2 418 aa8.65□□□□□ -1.02
HDLBP-227ENST00000458564 NOP16Q9Y3C1 178 aaKnown RBP8.65□□□□□ -1.02
HDLBP-227ENST00000458564 RNF114Q9Y508 228 aa8.65□□□□□ -1.02
HDLBP-227ENST00000458564 IGLV1-36A0A0B4J1U3 117 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 A0A1W2PRQ8 180 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 IMPA2O14732 288 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 TOX4O94842 621 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 ACSM4P0C7M7 580 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 FXYD6P3P58550 94 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 ECH1Q13011 328 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 KLF10Q13118 480 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 DGCR6Q14129 220 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 TAF9Q16594 264 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 IFI44LQ53G44 452 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 DNM1P34Q6PK57 102 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 DPY19L2P2Q6ZN68 376 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 CBLL1Q75N03 491 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 ARPINQ7Z6K5 226 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 PNLDC1Q8NA58 520 aaKnown RBP8.64□□□□□ -1.03
HDLBP-227ENST00000458564 UBE2FQ969M7 185 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 FAM46AQ96IP4 442 aaKnown RBP8.64□□□□□ -1.03
HDLBP-227ENST00000458564 WDFY2Q96P53 400 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 TECTBQ96PL2 329 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 PKP2Q99959 881 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 TMEM120AQ9BXJ8 343 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 TRIM15Q9C019 465 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 SLC22A4Q9H015 551 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 SIRPDQ9H106 197 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 RERGLQ9H628 205 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 WDR76Q9H967 626 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 TRIM36Q9NQ86 728 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 SAR1AQ9NR31 198 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 TNFRSF19Q9NS68 423 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 ERVK-18Q9QC07 812 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 RNF7Q9UBF6 113 aa8.64□□□□□ -1.03
HDLBP-227ENST00000458564 IGHV1-69DA0A0B4J2H0 117 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 SLC22A31A6NKX4 558 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 HMGB1P1B2RPK0 211 aaPredicted RBP8.63□□□□□ -1.03
HDLBP-227ENST00000458564 LGALS8O00214 317 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 DCTN6O00399 190 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 SOCS2O14508 198 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 NDUFA2O43678 99 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 GPR137BO60478 399 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 PPP1R3DO95685 299 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 IGHV1-69P01742 117 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 CDKN2AP42771 156 aaKnown RBP8.63□□□□□ -1.03
HDLBP-227ENST00000458564 OMPP47874 163 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 RPS6KA3P51812 740 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 MPPED2Q15777 294 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 MEP1BQ16820 701 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 METTL11BQ5VVY1 283 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 SLC18B1Q6NT16 456 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 CORO6Q6QEF8 472 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 CFAP77Q6ZQR2 320 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 RRM2BQ7LG56 351 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 TSEN54Q7Z6J9 526 aaKnown RBP8.63□□□□□ -1.03
HDLBP-227ENST00000458564 SLC26A10Q8NG04 563 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 RSRC1Q96IZ7 334 aaKnown RBP8.63□□□□□ -1.03
HDLBP-227ENST00000458564 TSSK2Q96PF2 358 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 ATF6BQ99941 703 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 MMADHCQ9H3L0 296 aaPredicted RBP8.63□□□□□ -1.03
HDLBP-227ENST00000458564 FN3KRPQ9HA64 309 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 SMURF1Q9HCE7 757 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 PNRC2Q9NPJ4 139 aaKnown RBP8.63□□□□□ -1.03
HDLBP-227ENST00000458564 CMTM6Q9NX76 183 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 RPS6KA6Q9UK32 745 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 ENPP4Q9Y6X5 453 aa8.63□□□□□ -1.03
HDLBP-227ENST00000458564 TRAV38-1A0A0B4J264 116 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 CXCR6O00574 342 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 GMDSO60547 372 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 ZNF682O95780 498 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 IGHV4-59P01825 116 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 MDH1P40925 334 aaKnown RBP8.62□□□□□ -1.03
HDLBP-227ENST00000458564 IER3P46695 156 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 PRSS12P56730 875 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 TRAP1Q12931 704 aaKnown RBP8.62□□□□□ -1.03
HDLBP-227ENST00000458564 MALLQ13021 153 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 PRAMEF6Q5VXH4 476 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 GDPGP1Q6ZNW5 385 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 PGAP1Q75T13 922 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 CYP4Z1Q86W10 505 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 SLC15A3Q8IY34 581 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 OR6V1Q8N148 313 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 ZSCAN4Q8NAM6 433 aaPredicted RBP8.62□□□□□ -1.03
HDLBP-227ENST00000458564 C19orf18Q8NEA5 215 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 SPRYD4Q8WW59 207 aaPredicted RBP8.62□□□□□ -1.03
HDLBP-227ENST00000458564 LRTOMTQ8WZ04 291 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 HSH2DQ96JZ2 352 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 C16orf95Q9H693 158 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 UFSP2Q9NUQ7 469 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 CYB5R1Q9UHQ9 305 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 ZNF281Q9Y2X9 895 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 IER3IP1Q9Y5U9 82 aa8.62□□□□□ -1.03
HDLBP-227ENST00000458564 A0A0U1RQK1 487 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms