RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 SYS1Q8N2H4 156 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 BPIFB6Q8NFQ5 453 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 GGHQ92820 318 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 NEUROG1Q92886 237 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 PIGTQ969N2 578 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 MARS2Q96GW9 593 aaKnown RBP12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 PLK3Q9H4B4 646 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 RGCCQ9H4X1 137 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 MOB1AQ9H8S9 216 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 FKBP14Q9NWM8 211 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 MRM2Q9UI43 246 aaKnown RBP12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF391Q9UJN7 358 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 STARD10Q9Y365 291 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 TPRKBQ9Y3C4 175 aa12.31□□□□□ -0.44
HMGXB4-204ENST00000455359 TACC2O95359 2948 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 IGLV3-9A0A075B6K5 115 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 SLC1A7O00341 560 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 GPRIN2O60269 458 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 FAM20BO75063 409 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 NGFP01138 241 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 RAC2P15153 192 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 MYL12AP19105 171 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 CFL1P23528 166 aaKnown RBP12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 RNLSQ5VYX0 342 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 VHLLQ6RSH7 139 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 PAMR1Q6UXH9 720 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 PRSS45Q7RTY3 260 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 SYNPRQ8TBG9 265 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 NINJ1Q92982 152 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 MYDGFQ969H8 173 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 CNBD2Q96M20 576 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 TBX5Q99593 518 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 YTHDF1Q9BYJ9 559 aaKnown RBP12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 OR10A2Q9H208 303 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 CBLN4Q9NTU7 201 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 CHCHD3Q9NX63 227 aaKnown RBP12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 ERVK13-1Q9NX77 482 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 CGGBP1Q9UFW8 167 aaPredicted RBP12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 BLOC1S6Q9UL45 172 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 MYRFQ9Y2G1 1151 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 POLQO75417 2590 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 RTTNQ86VV8 2226 aa12.3□□□□□ -0.44
HMGXB4-204ENST00000455359 TMEM269A0A1B0GVZ9 245 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 PRR32B1ATL7 298 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 XRCC2O43543 280 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 XPNPEP2O43895 674 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 IGHV3-13P01766 116 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 RAF1P04049 648 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 ANXA2P07355 339 aaKnown RBP12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 SELEP16581 610 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 LIPAP38571 399 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 KLF3P57682 345 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF121P58317 390 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 KRTAP10-9P60411 292 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 SNRPD2P62316 118 aaKnown RBP12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 ST3GAL4Q11206 333 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 SWI5Q1ZZU3 235 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 RBM48Q5RL73 367 aaKnown RBP12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 TMPRSS11AQ6ZMR5 421 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 SSX6Q7RTT6 188 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 RFLNBQ8N5W9 214 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF540Q8NDQ6 660 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 SLC25A40Q8TBP6 338 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 KLF14Q8TD94 323 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 IGFBPL1Q8WX77 278 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 SPSB4Q96A44 273 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 HAVCR1Q96D42 359 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 LURAP1Q96LR2 239 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 ZNF649Q9BS31 505 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 TRAF4Q9BUZ4 470 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 ALG8Q9BVK2 526 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 OR2J1Q9GZK6 312 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 CYSLTR2Q9NS75 346 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 NUFIP1Q9UHK0 495 aaKnown RBP12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 CAB39Q9Y376 341 aaPredicted RBP12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 LRRC42Q9Y546 428 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 SNX5Q9Y5X3 404 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 R4GMQ9 66 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 FBN2P35556 2912 aa12.29□□□□□ -0.44
HMGXB4-204ENST00000455359 AKAP6Q13023 2319 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 ATE1O95260 518 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 MT-ND5P03915 603 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 SOD3P08294 240 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 RPSAP08865 295 aaKnown RBP12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 LIMS3P0CW19 117 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 LIMS4P0CW20 117 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 KITLGP21583 273 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 MST1LQ2TV78 715 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 LIPNQ5VXI9 398 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 FDX2Q6P4F2 183 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 NAA40Q86UY6 237 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 STX19Q8N4C7 294 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 YIPF7Q8N8F6 280 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 MBD6Q96DN6 1003 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 PGAM5Q96HS1 289 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 CCL19Q99731 98 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 REPIN1Q9BWE0 567 aaKnown RBP12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 MRPL37Q9BZE1 423 aaKnown RBP12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 OR51B6Q9H340 312 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 DUSP21Q9H596 190 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms