RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 AGBL5Q8NDL9 886 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 TMEM104Q8NE00 496 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 GPR137Q96N19 417 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 SLC39A1Q9NY26 324 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 PIPOXQ9P0Z9 390 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 KLK13Q9UKR3 277 aa13.11□□□□□ -0.31
SF1-211ENST00000448404 TMEM265A0A087WTH1 108 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 OR5H15A6NDH6 313 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 NUPL2O15504 423 aaKnown RBP13.1□□□□□ -0.31
SF1-211ENST00000448404 RFPL3SP0C7P2 107 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 GNB3P16520 340 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 MNDAP41218 407 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 H2BFSP57053 126 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 TAF13Q15543 124 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 GLT8D1Q68CQ7 371 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 LIN54Q6MZP7 749 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 PAQR4Q8N4S7 273 aaPredicted RBP13.1□□□□□ -0.31
SF1-211ENST00000448404 NOXO1Q8NFA2 376 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 ZNF416Q9BWM5 594 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 HEXA-AS1Q9H8Q6 139 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 SPTBN2O15020 2390 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 OR2M5A3KFT3 312 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 NDUFB6O95139 128 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 NAT2P11245 290 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 FGF5P12034 268 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 HSD11B1P28845 292 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 NTF4P34130 210 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 TSPAN5P62079 268 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 Q0VFX4 171 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 ANGPT1Q15389 498 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 HACD4Q5VWC8 232 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 GLDNQ6ZMI3 551 aaPredicted RBP13.1□□□□□ -0.31
SF1-211ENST00000448404 C1orf210Q8IVY1 113 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 MUC20Q8N307 709 aaPredicted RBP13.1□□□□□ -0.31
SF1-211ENST00000448404 OR8B12Q8NGG6 310 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 IMMP1LQ96LU5 166 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 C1orf198Q9H425 327 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 GPR84Q9NQS5 396 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 COPZ2Q9P299 210 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 C19orf25Q9UFG5 118 aaPredicted RBP13.1□□□□□ -0.31
SF1-211ENST00000448404 DOCK10Q96BY6 2186 aa13.1□□□□□ -0.31
SF1-211ENST00000448404 MTRF1O75570 445 aaKnown RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 ECDO95905 644 aaPredicted RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 IGHG1P01857 330 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 DNM1P34Q6PK57 102 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 TIPARPQ7Z3E1 657 aaKnown RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 ZNF454Q8N9F8 522 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 TMEM138Q9NPI0 162 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 ZNF275Q9NSD4 429 aaPredicted RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 ZNF230Q9UIE0 474 aaPredicted RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 ZIC3O60481 467 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 IGHV3-9P01782 118 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 POU3F2P20265 443 aaPredicted RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 AP3S2P59780 193 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 PSMA6P60900 246 aaKnown RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 EXOSC2Q13868 293 aaKnown RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 GRK1Q15835 563 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 SFRP5Q5T4F7 317 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 KLHL24Q6TFL4 600 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 UBALD2Q8IYN6 164 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 CLEC1AQ8NC01 280 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 OR10K1Q8NGX5 313 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 RNF138Q8WVD3 245 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 RBM24Q9BX46 236 aaKnown RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 AUP1Q9Y679 476 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 NSG1A0A0A6YYJ2 146 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 A0A1B0GTI1 187 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 ZNF726A6NNF4 738 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 AMY2AP04746 511 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 HOXD4P09016 255 aaPredicted RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 OR3A4PP47883 348 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 SLC6A9P48067 706 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 PCK2Q16822 640 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 C4orf46Q504U0 113 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 STEAP1BQ6NZ63 245 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 ZNF813Q6ZN06 617 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 RPS19BP1Q86WX3 136 aaKnown RBP13.09□□□□□ -0.31
SF1-211ENST00000448404 GABRG1Q8N1C3 465 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 OR6N1Q8NGY5 312 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 SRXN1Q9BYN0 137 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 POTEKPQ9BYX7 375 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 EXO5Q9H790 373 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 RHBDD3Q9Y3P4 386 aa13.09□□□□□ -0.31
SF1-211ENST00000448404 NCKAP5O14513 1909 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 A0A0J9YW62 118 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 GOSR2O14653 212 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 ZNF17P17021 662 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 SUMO3P55854 103 aaPredicted RBP13.08□□□□□ -0.32
SF1-211ENST00000448404 TMEM81Q6P7N7 255 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 TMPPEQ6ZT21 453 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 ZNF283Q8N7M2 679 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 OR2AJ1Q8NGZ0 328 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 MAFIPQ8WZ33 124 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 FBXW5Q969U6 566 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 CMTM3Q96MX0 182 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 SELENOIQ9C0D9 397 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 NPDC1Q9NQX5 325 aaPredicted RBP13.08□□□□□ -0.32
SF1-211ENST00000448404 RDH8Q9NYR8 311 aa13.08□□□□□ -0.32
SF1-211ENST00000448404 NTN3O00634 580 aaPredicted RBP13.08□□□□□ -0.32
SF1-211ENST00000448404 CCSO14618 274 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms