RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ZNF765Q7L2R6 523 aa17.22■□□□□ 0.35
HMGA1-205ENST00000447654 C5orf24Q7Z6I8 188 aa17.22■□□□□ 0.35
HMGA1-205ENST00000447654 NUP43Q8NFH3 380 aa17.22■□□□□ 0.35
HMGA1-205ENST00000447654 OR5K2Q8NHB8 316 aa17.22■□□□□ 0.35
HMGA1-205ENST00000447654 CCNL2Q96S94 520 aaPredicted RBP17.22■□□□□ 0.35
HMGA1-205ENST00000447654 SERGEFQ9UGK8 458 aa17.22■□□□□ 0.35
HMGA1-205ENST00000447654 FBXL21Q9UKT6 434 aa17.22■□□□□ 0.35
HMGA1-205ENST00000447654 TMED7Q9Y3B3 224 aa17.22■□□□□ 0.35
HMGA1-205ENST00000447654 TRAV27A0A087WT01 109 aa17.21■□□□□ 0.35
HMGA1-205ENST00000447654 UPK3AO75631 287 aa17.21■□□□□ 0.35
HMGA1-205ENST00000447654 ZIC2O95409 532 aaPredicted RBP17.21■□□□□ 0.35
HMGA1-205ENST00000447654 LMO1P25800 156 aa17.21■□□□□ 0.35
HMGA1-205ENST00000447654 SOX2P48431 317 aa17.21■□□□□ 0.35
HMGA1-205ENST00000447654 PDX1P52945 283 aa17.21■□□□□ 0.35
HMGA1-205ENST00000447654 OR5AR1Q8NGP9 310 aa17.21■□□□□ 0.35
HMGA1-205ENST00000447654 SUSD6Q92537 303 aa17.21■□□□□ 0.35
HMGA1-205ENST00000447654 DPEP2Q9H4A9 486 aa17.21■□□□□ 0.35
HMGA1-205ENST00000447654 OR5AC2Q9NZP5 309 aa17.21■□□□□ 0.35
HMGA1-205ENST00000447654 OR14J1Q9UGF5 321 aa17.21■□□□□ 0.35
HMGA1-205ENST00000447654 STRAPQ9Y3F4 350 aaKnown RBP17.21■□□□□ 0.35
HMGA1-205ENST00000447654 LOC100509620A0A075B734 347 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 IGLON5A6NGN9 336 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 LINC01565O15544 149 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF354AO60765 605 aaPredicted RBP17.21■□□□□ 0.34
HMGA1-205ENST00000447654 APBB3O95704 486 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 GZMBP10144 247 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 CD37P11049 281 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF28P17035 718 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 TDGF1P3P51864 188 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 C2orf27AQ580R0 203 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 SOHLH1Q5JUK2 328 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 OR4C11Q6IEV9 310 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 OR51A7Q8NH64 312 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 PTX4Q96A99 478 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 MRGPRFQ96AM1 343 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 POM121Q96HA1 1249 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 LINC00615Q96LM1 132 aaPredicted RBP17.21■□□□□ 0.34
HMGA1-205ENST00000447654 GNRHR2Q96P88 292 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 TMEM208Q9BTX3 173 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 RPP25Q9BUL9 199 aaKnown RBP17.21■□□□□ 0.34
HMGA1-205ENST00000447654 SNHG12Q9BXW3 62 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 ARV1Q9H2C2 271 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 CRLF2Q9HC73 371 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 ASCL3Q9NQ33 180 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 FRRS1LQ9P0K9 344 aa17.21■□□□□ 0.34
HMGA1-205ENST00000447654 THAP10Q9P2Z0 257 aaPredicted RBP17.21■□□□□ 0.34
HMGA1-205ENST00000447654 OR5AC1P0C628 307 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 SEC11BP0C7V7 166 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 DANCRP0C864 163 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 EBPQ15125 230 aaKnown RBP17.2■□□□□ 0.34
HMGA1-205ENST00000447654 SHHQ15465 462 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 DUSP5Q16690 384 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 MDGA2Q7Z553 956 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 C17orf64Q86WR6 236 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 OR2L2Q8NH16 312 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF563Q8TA94 476 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 ADAMTS15Q8TE58 950 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 TMEM106AQ96A25 262 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 COX14Q96I36 57 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 ADGRG7Q96K78 797 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF587Q96SQ5 575 aaPredicted RBP17.2■□□□□ 0.34
HMGA1-205ENST00000447654 NMNAT2Q9BZQ4 307 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 PLA2G2EQ9NZK7 142 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 MEMO1Q9Y316 297 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 SLCO1B1Q9Y6L6 691 aa17.2■□□□□ 0.34
HMGA1-205ENST00000447654 GOLGA4Q13439 2230 aaKnown RBP17.2■□□□□ 0.34
HMGA1-205ENST00000447654 TMEM235A6NFC5 223 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 OR4C45A6NMZ5 311 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 FCMRO60667 390 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 KAT7O95251 611 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 PCCBP05166 539 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 LIPCP11150 499 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 HIST1H1CP16403 213 aaKnown RBP17.19■□□□□ 0.34
HMGA1-205ENST00000447654 CSNK2A2P19784 350 aaPredicted RBP17.19■□□□□ 0.34
HMGA1-205ENST00000447654 REEP5Q00765 189 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 RUNX3Q13761 415 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 ZNHIT3Q15649 155 aaPredicted RBP17.19■□□□□ 0.34
HMGA1-205ENST00000447654 HAGHQ16775 308 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 TMEM128Q5BJH2 165 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 GFI1BQ5VTD9 330 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 MED25Q71SY5 747 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 SLC35D2Q76EJ3 337 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 C9orf40Q8IXQ3 194 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 Q8WTZ3 238 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 C2orf50Q96LR7 162 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 Q96M85 177 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 TNFRSF13CQ96RJ3 184 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 INSM2Q96T92 566 aaPredicted RBP17.19■□□□□ 0.34
HMGA1-205ENST00000447654 MRPS18CQ9Y3D5 142 aaKnown RBP17.19■□□□□ 0.34
HMGA1-205ENST00000447654 WDR45Q9Y484 360 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 A0A087WZY1 265 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 NDUFB2O95178 105 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 RPS2P15880 293 aaKnown RBP17.19■□□□□ 0.34
HMGA1-205ENST00000447654 THBS4P35443 961 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 KIR3DL2P43630 455 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 RAC1P63000 192 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 RASGEF1BQ0VAM2 473 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 TTLL10Q6ZVT0 673 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 ZNF627Q7L945 461 aa17.19■□□□□ 0.34
HMGA1-205ENST00000447654 OR4K13Q8NH42 304 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms