RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SNAI3Q3KNW1 292 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 ZNF773Q6PK81 442 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 PRSS45Q7RTY3 260 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 KCTD20Q7Z5Y7 419 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 KLBQ86Z14 1044 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 ZNF485Q8NCK3 441 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 ABHD4Q8TB40 342 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 RORBQ92753 470 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 PGAM5Q96HS1 289 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 OR5M11Q96RB7 305 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 C1QTNF5Q9BXJ0 243 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 ZNF696Q9H7X3 374 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 SLC24A3Q9HC58 644 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 FAM206AQ9NX38 181 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 EIF3KQ9UBQ5 218 aaKnown RBP15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 STARD10Q9Y365 291 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 SNX5Q9Y5X3 404 aa15.52■□□□□ 0.08
TRAPPC4-203ENST00000447216 LOC110117498-PIK3R3F6TDL0 507 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 TBX1O43435 398 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 GPRIN2O60269 458 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 LALBAP00709 142 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 DCTDP32321 178 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 GTF2A1P52655 376 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 GBX2P52951 348 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 UCP2P55851 309 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 WNT4P56705 351 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 SPATA46Q5T0L3 261 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 XAF1Q6GPH4 301 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 VHLLQ6RSH7 139 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 SPARTQ8N0X7 666 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 MYCBPQ99417 103 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 MND1Q9BWT6 205 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 PTTG3PQ9NZH4 202 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 ZNF319Q9P2F9 582 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 POU2F3Q9UKI9 436 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 SLC22A13Q9Y226 551 aa15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 LSM2Q9Y333 95 aaKnown RBP15.51■□□□□ 0.07
TRAPPC4-203ENST00000447216 MRPS14O60783 128 aaKnown RBP15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 APOC1P02654 83 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 LCKP06239 509 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 NR4A1P22736 598 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 PCSK6P29122 969 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 KIR3DL2P43630 455 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 RGS6P49758 472 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 NANOS3P60323 173 aaKnown RBP15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 PPP1CBP62140 327 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 NKX6-1P78426 367 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 ARL9Q6T311 187 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 ZNF704Q6ZNC4 412 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 COLCA1Q6ZS62 124 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 CATSPERDQ86XM0 798 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 PRSS35Q8N3Z0 413 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 ZFP41Q8N8Y5 198 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 TSPAN14Q8NG11 270 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 OR8B12Q8NGG6 310 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 OR1J1Q8NGS3 322 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 OR2AE1Q8NHA4 323 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 APOBEC3DQ96AK3 386 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 TMEM204Q9BSN7 226 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 PBOV1Q9GZY1 135 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 G6PC2Q9NQR9 355 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 TBCCD1Q9NVR7 557 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 OR52A1Q9UKL2 312 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 DCHS2Q6V1P9 2916 aa15.5■□□□□ 0.07
TRAPPC4-203ENST00000447216 A0A1W2PPR1 153 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 ICMTO60725 284 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 RPSAP08865 295 aaKnown RBP15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 THBS4P35443 961 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 MMP16P51512 607 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 PRSS12P56730 875 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 EMX1Q04741 257 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 MED22Q15528 200 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 TBCEQ15813 527 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 MSMPQ1L6U9 139 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 ODF4Q2M2E3 257 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 GFOD2Q3B7J2 385 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 WDR38Q5JTN6 314 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 GLYATL3Q5SZD4 288 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 BCL2L15Q5TBC7 163 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 SVOPQ8N4V2 548 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 OR2G2Q8NGZ5 317 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 LILRB1Q8NHL6 650 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 SLC25A40Q8TBP6 338 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 ACOT13Q9NPJ3 140 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 BABAM2Q9NXR7 383 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 ST6GALNAC2Q9UJ37 374 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 FZR1Q9UM11 496 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 SPEF1Q9Y4P9 236 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 SIRT4Q9Y6E7 314 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 CRYBG3Q68DQ2 2970 aa15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 RAI1Q7Z5J4 1906 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC4-203ENST00000447216 AKAP6Q13023 2319 aa15.48■□□□□ 0.07
TRAPPC4-203ENST00000447216 PNMA8CA0A1B0GUJ8 204 aa15.48■□□□□ 0.07
TRAPPC4-203ENST00000447216 E7EQL1 145 aa15.48■□□□□ 0.07
TRAPPC4-203ENST00000447216 SMIM18P0DKX4 95 aa15.48■□□□□ 0.07
TRAPPC4-203ENST00000447216 ATP6V1B1P15313 513 aa15.48■□□□□ 0.07
TRAPPC4-203ENST00000447216 PCMT1P22061 227 aa15.48■□□□□ 0.07
TRAPPC4-203ENST00000447216 RAD52P43351 418 aa15.48■□□□□ 0.07
TRAPPC4-203ENST00000447216 ALKBH1Q13686 389 aaKnown RBP15.48■□□□□ 0.07
TRAPPC4-203ENST00000447216 SPHARQ15513 63 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms