RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 KDM8Q8N371 416 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 ADAD2Q8NCV1 583 aaKnown RBP17■□□□□ 0.31
SDCBP-204ENST00000447182 OR4K17Q8NGC6 315 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 NMES1Q9C002 83 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 RAB33BQ9H082 229 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 FN3KRPQ9HA64 309 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 CHMP1AQ9HD42 196 aaPredicted RBP17■□□□□ 0.31
SDCBP-204ENST00000447182 TMEM100Q9NV29 134 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 CD207Q9UJ71 328 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 NPIPA1Q9UND3 350 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 PCDH15Q96QU1 1955 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 TTRP02766 147 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 VAMP1P23763 118 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 NSDHLQ15738 373 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 PNLIPRP3Q17RR3 467 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 HOGA1Q86XE5 327 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 ARMC10Q8N2F6 343 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 TMEM234Q8WY98 164 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 SLC5A6Q9Y289 635 aa17■□□□□ 0.31
SDCBP-204ENST00000447182 TMEM14DPA8MWL7 114 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 IFNA6P05013 189 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 CX3CR1P49238 355 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 PPM1FP49593 454 aaPredicted RBP16.99■□□□□ 0.31
SDCBP-204ENST00000447182 ARHGDIBP52566 201 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 CYCSP99999 105 aaKnown RBP16.99■□□□□ 0.31
SDCBP-204ENST00000447182 C17orf82Q86X59 251 aaPredicted RBP16.99■□□□□ 0.31
SDCBP-204ENST00000447182 GKN2Q86XP6 184 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 MISPQ8IVT2 679 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 SVBPQ8N300 66 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 SLC30A7Q8NEW0 376 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 OR10R2Q8NGX6 335 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 MFSD8Q8NHS3 518 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 CASTOR1Q8WTX7 329 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 ADAT3Q96EY9 351 aaPredicted RBP16.99■□□□□ 0.31
SDCBP-204ENST00000447182 CENPMQ9NSP4 180 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 SLC39A1Q9NY26 324 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 KLF2Q9Y5W3 355 aaPredicted RBP16.99■□□□□ 0.31
SDCBP-204ENST00000447182 MYO9BQ13459 2157 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 IGKV1D-43A0A0B4J1Z2 117 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 NUDT19A8MXV4 375 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 EEF1E1-BLOC1S5C9J1V9 151 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 SSX5O60225 188 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 TPT1P13693 172 aaKnown RBP16.99■□□□□ 0.31
SDCBP-204ENST00000447182 GNB3P16520 340 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 AKR1C4P17516 323 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 GNALP38405 381 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 GPR85P60893 370 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 UNQ6126/PRO20091Q6UXV3 157 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 H1FNTQ75WM6 255 aaPredicted RBP16.99■□□□□ 0.31
SDCBP-204ENST00000447182 KCTD9Q7L273 389 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 WDFY1Q8IWB7 410 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 LINC00518Q8N0U6 118 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 OR5D14Q8NGL3 314 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 ZDHHC12Q96GR4 267 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 TSNAXQ99598 290 aaKnown RBP16.99■□□□□ 0.31
SDCBP-204ENST00000447182 CDC6Q99741 560 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 PTGES2Q9H7Z7 377 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 HPF1Q9NWY4 346 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 DHCR7Q9UBM7 475 aaKnown RBP16.99■□□□□ 0.31
SDCBP-204ENST00000447182 NDRG3Q9UGV2 375 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 ANAPC10Q9UM13 185 aa16.99■□□□□ 0.31
SDCBP-204ENST00000447182 SYT7O43581 403 aa16.98■□□□□ 0.31
SDCBP-204ENST00000447182 CD79AP11912 226 aa16.98■□□□□ 0.31
SDCBP-204ENST00000447182 PGAM2P15259 253 aa16.98■□□□□ 0.31
SDCBP-204ENST00000447182 NME1P15531 152 aaKnown RBP16.98■□□□□ 0.31
SDCBP-204ENST00000447182 DLX2Q07687 328 aaPredicted RBP16.98■□□□□ 0.31
SDCBP-204ENST00000447182 C10orf91Q5T1B1 145 aa16.98■□□□□ 0.31
SDCBP-204ENST00000447182 GTPBP8Q8N3Z3 284 aaPredicted RBP16.98■□□□□ 0.31
SDCBP-204ENST00000447182 ELP5Q8TE02 316 aa16.98■□□□□ 0.31
SDCBP-204ENST00000447182 ST8SIA1Q92185 356 aa16.98■□□□□ 0.31
SDCBP-204ENST00000447182 ASF1BQ9NVP2 202 aa16.98■□□□□ 0.31
SDCBP-204ENST00000447182 ZNF175Q9Y473 711 aa16.98■□□□□ 0.31
SDCBP-204ENST00000447182 CSAG2Q9Y5P2 127 aa16.98■□□□□ 0.31
SDCBP-204ENST00000447182 ARID1BQ8NFD5 2236 aaPredicted RBP16.98■□□□□ 0.31
SDCBP-204ENST00000447182 CEACAM18A8MTB9 384 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 CHRM2P08172 466 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 CLDN6P56747 220 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 LMX1AQ8TE12 382 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 SLAMF6Q96DU3 332 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 SELENOIQ9C0D9 397 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 PBOV1Q9GZY1 135 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 C5orf51A6NDU8 294 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 PRKACAP17612 351 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 SERPINF1P36955 418 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 HSF1Q00613 529 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 TMEM128Q5BJH2 165 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 KLHL24Q6TFL4 600 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 BAP18Q8IXM2 172 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 PUSL1Q8N0Z8 303 aaKnown RBP16.97■□□□□ 0.31
SDCBP-204ENST00000447182 OR4K15Q8NH41 348 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 ARL5BQ96KC2 179 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 RNF126Q9BV68 326 aa16.97■□□□□ 0.31
SDCBP-204ENST00000447182 GPR31O00270 319 aa16.96■□□□□ 0.31
SDCBP-204ENST00000447182 FBLP22087 321 aaKnown RBP16.96■□□□□ 0.31
SDCBP-204ENST00000447182 OR7A5Q15622 319 aa16.96■□□□□ 0.31
SDCBP-204ENST00000447182 TERB2Q8NHR7 220 aa16.96■□□□□ 0.31
SDCBP-204ENST00000447182 MARCH1Q8TCQ1 289 aa16.96■□□□□ 0.31
SDCBP-204ENST00000447182 DCUN1D4Q92564 292 aa16.96■□□□□ 0.31
SDCBP-204ENST00000447182 RELTQ969Z4 430 aa16.96■□□□□ 0.31
SDCBP-204ENST00000447182 NKX2-4Q9H2Z4 354 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms