RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 C1QL4Q86Z23 238 aa20.21■□□□□ 0.83
PMS1-214ENST00000446877 BOLLQ8N9W6 283 aaKnown RBP20.21■□□□□ 0.83
PMS1-214ENST00000446877 SCCPDHQ8NBX0 429 aa20.21■□□□□ 0.83
PMS1-214ENST00000446877 SPRYD4Q8WW59 207 aaPredicted RBP20.21■□□□□ 0.83
PMS1-214ENST00000446877 FN3KRPQ9HA64 309 aa20.21■□□□□ 0.83
PMS1-214ENST00000446877 GID8Q9NWU2 228 aa20.21■□□□□ 0.83
PMS1-214ENST00000446877 RNF7Q9UBF6 113 aa20.21■□□□□ 0.83
PMS1-214ENST00000446877 RPS6KA6Q9UK32 745 aa20.21■□□□□ 0.83
PMS1-214ENST00000446877 NOP16Q9Y3C1 178 aaKnown RBP20.21■□□□□ 0.83
PMS1-214ENST00000446877 SOCS2O14508 198 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 MMP9P14780 707 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 CD200P41217 278 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 RAD23AP54725 363 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 HIST1H3AP68431 136 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 HIST2H3PS2Q5TEC6 136 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 PRAMEF6Q5VXH4 476 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 SFRP4Q6FHJ7 346 aaPredicted RBP20.2■□□□□ 0.82
PMS1-214ENST00000446877 DNM1P34Q6PK57 102 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 HIST2H3AQ71DI3 136 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 FAM110DQ8TAY7 271 aaPredicted RBP20.2■□□□□ 0.82
PMS1-214ENST00000446877 LHX4Q969G2 390 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 NRIP3Q9NQ35 241 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 TRIM36Q9NQ86 728 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 MRGBPQ9NV56 204 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 LHFPL6Q9Y693 200 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 DOCK11Q5JSL3 2073 aa20.2■□□□□ 0.82
PMS1-214ENST00000446877 BBIP1A8MTZ0 92 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 LGALS8O00214 317 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 ADAM20O43506 726 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 NDUFA2O43678 99 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 ZNF682O95780 498 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 CRABP1P29762 137 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 PRSS12P56730 875 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 PROK1P58294 105 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 GK2Q14410 553 aaPredicted RBP20.19■□□□□ 0.82
PMS1-214ENST00000446877 OR8G1Q15617 311 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 OR8B8Q15620 311 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 MPPED2Q15777 294 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 CORO6Q6QEF8 472 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 GDPGP1Q6ZNW5 385 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 COLCA1Q6ZS62 124 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 SLCO4A1Q96BD0 722 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 SLC22A4Q9H015 551 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 DPAGT1Q9H3H5 408 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 IER3IP1Q9Y5U9 82 aa20.19■□□□□ 0.82
PMS1-214ENST00000446877 C3orf80F5H4A9 247 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 F5H5K5 113 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 IMPA2O14732 288 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 TSPAN15O95858 294 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 LCATP04180 440 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 IER3P46695 156 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 ECH1Q13011 328 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 MAPRE2Q15555 327 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 MEP1BQ16820 701 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 FKBP9P1Q75LS8 142 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 PGAP1Q75T13 922 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 CYP4Z1Q86W10 505 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 LRTOMTQ8WZ04 291 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 FAM46AQ96IP4 442 aaKnown RBP20.18■□□□□ 0.82
PMS1-214ENST00000446877 PITX2Q99697 317 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 CTSZQ9UBR2 303 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 FAM96BQ9Y3D0 163 aa20.18■□□□□ 0.82
PMS1-214ENST00000446877 TRAV38-1A0A0B4J264 116 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 A0A0U1RQK1 487 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 PTP4A3O75365 173 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 RPS6KA3P51812 740 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 ARF6P62330 175 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 COX10Q12887 443 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 RSPO1Q2MKA7 263 aaPredicted RBP20.17■□□□□ 0.82
PMS1-214ENST00000446877 C2orf68Q2NKX9 166 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 IFI44LQ53G44 452 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 PTCHD4Q6ZW05 846 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 LDLRAD3Q86YD5 345 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 ANKRD19PQ9H560 264 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 SIGLEC7Q9Y286 467 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 ZNF281Q9Y2X9 895 aa20.17■□□□□ 0.82
PMS1-214ENST00000446877 LOC100653049A0A140TA62 436 aa20.16■□□□□ 0.82
PMS1-214ENST00000446877 EDF1O60869 148 aaKnown RBP20.16■□□□□ 0.82
PMS1-214ENST00000446877 KRT34O76011 436 aa20.16■□□□□ 0.82
PMS1-214ENST00000446877 ACSM4P0C7M7 580 aa20.16■□□□□ 0.82
PMS1-214ENST00000446877 CA6P23280 308 aa20.16■□□□□ 0.82
PMS1-214ENST00000446877 DPY19L2P2Q6ZN68 376 aa20.16■□□□□ 0.82
PMS1-214ENST00000446877 MRPL21Q7Z2W9 205 aaKnown RBP20.16■□□□□ 0.82
PMS1-214ENST00000446877 ZSCAN4Q8NAM6 433 aaPredicted RBP20.16■□□□□ 0.82
PMS1-214ENST00000446877 TSSK2Q96PF2 358 aa20.16■□□□□ 0.82
PMS1-214ENST00000446877 GPX7Q96SL4 187 aaPredicted RBP20.16■□□□□ 0.82
PMS1-214ENST00000446877 SIRPDQ9H106 197 aa20.16■□□□□ 0.82
PMS1-214ENST00000446877 RASSF4Q9H2L5 321 aa20.16■□□□□ 0.82
PMS1-214ENST00000446877 ECDO95905 644 aaPredicted RBP20.15■□□□□ 0.82
PMS1-214ENST00000446877 MDH1P40925 334 aaKnown RBP20.15■□□□□ 0.82
PMS1-214ENST00000446877 CDKN2AP42771 156 aaKnown RBP20.15■□□□□ 0.82
PMS1-214ENST00000446877 HOXA4Q00056 320 aaPredicted RBP20.15■□□□□ 0.82
PMS1-214ENST00000446877 KLF10Q13118 480 aa20.15■□□□□ 0.82
PMS1-214ENST00000446877 PLPP7Q8NBV4 271 aa20.15■□□□□ 0.82
PMS1-214ENST00000446877 OR2AJ1Q8NGZ0 328 aa20.15■□□□□ 0.82
PMS1-214ENST00000446877 ATF6BQ99941 703 aa20.15■□□□□ 0.82
PMS1-214ENST00000446877 TMEM120AQ9BXJ8 343 aa20.15■□□□□ 0.82
PMS1-214ENST00000446877 SMURF1Q9HCE7 757 aa20.15■□□□□ 0.82
PMS1-214ENST00000446877 SRA1Q9HD15 236 aaKnown RBP20.15■□□□□ 0.82
PMS1-214ENST00000446877 AP3M1Q9Y2T2 418 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms