RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 HLA-DQA2P01906 255 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 ADRA2CP18825 462 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 TUBG1P23258 451 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 PMELP40967 661 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 RGS6P49758 472 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 MMP16P51512 607 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 LCN2P80188 198 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 CBX1P83916 185 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 GK2Q14410 553 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-203ENST00000444440 ZMYND11Q15326 602 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 SNAI3Q3KNW1 292 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 FAM201AQ5SY85 155 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 C1orf146Q5VVC0 180 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 FAHD2BQ6P2I3 314 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-203ENST00000444440 CCDC121Q6ZUS5 278 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 HS3ST5Q8IZT8 346 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 LNX2Q8N448 690 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 IQCF1Q8N6M8 205 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 ZNF511Q8NB15 262 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 OR2T33Q8NG76 320 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 OR8G5Q8NG78 346 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 RAB1CQ92928 201 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 APOBEC3DQ96AK3 386 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-203ENST00000444440 RAB39BQ96DA2 213 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 FAHD2AQ96GK7 314 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 TIMD4Q96H15 378 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 MEGF10Q96KG7 1140 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 PITX2Q99697 317 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 SLC30A2Q9BRI3 323 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 NMNAT2Q9BZQ4 307 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 MED20Q9H944 212 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 GCM1Q9NP62 436 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 TUBG2Q9NRH3 451 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 PDP1Q9P0J1 537 aaPredicted RBP9.15□□□□□ -0.94
SF3A1-203ENST00000444440 IL19Q9UHD0 177 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 OPN4Q9UHM6 478 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 FBN3Q75N90 2809 aa9.15□□□□□ -0.94
SF3A1-203ENST00000444440 TENM1Q9UKZ4 2725 aa9.15□□□□□ -0.95
SF3A1-203ENST00000444440 A0A1B0GWJ7 208 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 F5H0A9 414 aaPredicted RBP9.14□□□□□ -0.95
SF3A1-203ENST00000444440 TRAPPC2LH3BP13 241 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 J3QW42 95 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 CYB5R3P00387 301 aaPredicted RBP9.14□□□□□ -0.95
SF3A1-203ENST00000444440 HLA-DPB1P04440 258 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 SBK2P0C263 348 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 ANXA8P13928 327 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF823P16415 610 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 SPI1P17947 270 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 ZMAT1Q5H9K5 638 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 LINC01590Q5TEZ4 76 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 RFLNBQ8N5W9 214 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 PROKR2Q8NFJ6 384 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 SEMA6DQ8NFY4 1073 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 OR2AJ1Q8NGZ0 328 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 OR2T4Q8NH00 348 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 OR2AE1Q8NHA4 323 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 TEX47Q8TBZ9 253 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 NRBF2Q96F24 287 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 COG8Q96MW5 612 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
SF3A1-203ENST00000444440 TEX12Q9BXU0 123 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 MMP26Q9NRE1 261 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 PPP1R3CQ9UQK1 317 aa9.14□□□□□ -0.95
SF3A1-203ENST00000444440 FAM183AA6NL82 134 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 RIIAD1A6NNX1 92 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 H3BN98 237 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 TMEM178BH3BS89 294 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 M0R135 149 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 EBAG9O00559 213 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 FSHBP01225 129 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 LCATP04180 440 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 OTX1P32242 354 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-203ENST00000444440 BLVRAP53004 296 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 BTG1P62324 171 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 MAB21L1Q13394 359 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 PCK2Q16822 640 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 DCXRQ7Z4W1 244 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 MOGAT3Q86VF5 341 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 LRRC28Q86X40 367 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-203ENST00000444440 C10orf67Q8IYJ2 551 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 ATG16L2Q8NAA4 619 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 OR5L1Q8NGL2 311 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 ST7LQ8TDW4 575 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 DNAJC9Q8WXX5 260 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 DVL3Q92997 716 aaPredicted RBP9.13□□□□□ -0.95
SF3A1-203ENST00000444440 SLCO4A1Q96BD0 722 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF799Q96GE5 643 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 AMELYQ99218 206 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 PATZ1Q9HBE1 687 aaKnown RBP9.13□□□□□ -0.95
SF3A1-203ENST00000444440 DDX28Q9NUL7 540 aaKnown RBP9.13□□□□□ -0.95
SF3A1-203ENST00000444440 KCNG2Q9UJ96 466 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 METRNQ9UJH8 293 aa9.13□□□□□ -0.95
SF3A1-203ENST00000444440 CEACAM18A8MTB9 384 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 TCF21O43680 179 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 HMGN1P05114 100 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 SPARCP09486 303 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 SLC2A1P11166 492 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 FCGR1AP12314 374 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 ZNF3P17036 446 aa9.12□□□□□ -0.95
SF3A1-203ENST00000444440 TNFRSF1AP19438 455 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms