RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 H3BSH0 61 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 EFSO43281 561 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 XRCC2O43543 280 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 ORC5O43913 435 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 LCATP04180 440 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 HCKP08631 526 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 COX5BP10606 129 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 B4GALT1P15291 398 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 CCL1P22362 96 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 ARF1P84077 181 aaKnown RBP5.3□□□□□ -1.56
VPS50-205ENST00000441602 SPOCK1Q08629 439 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 CAMK2BQ13554 666 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 CNN3Q15417 329 aaKnown RBP5.3□□□□□ -1.56
VPS50-205ENST00000441602 BAK1Q16611 211 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 EIF2S3LQ2VIR3 472 aaKnown RBP5.3□□□□□ -1.56
VPS50-205ENST00000441602 GFOD2Q3B7J2 385 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 PHYHD1Q5SRE7 291 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 C1orf100Q5SVJ3 147 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 FGD2Q7Z6J4 655 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 NR2C2APQ86WQ0 139 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 CMTM4Q8IZR5 234 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 OR4M2Q8NGB6 313 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 DEDD2Q8WXF8 326 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 PTX4Q96A99 478 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 WDYHV1Q96HA8 205 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 GMPPAQ96IJ6 420 aaPredicted RBP5.3□□□□□ -1.56
VPS50-205ENST00000441602 SDHCQ99643 169 aaPredicted RBP5.3□□□□□ -1.56
VPS50-205ENST00000441602 DPAGT1Q9H3H5 408 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 OR5V1Q9UGF6 321 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 RAB22AQ9UL26 194 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 SLC5A6Q9Y289 635 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 KCNMB2Q9Y691 235 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 GABARAPH6UMI1 98 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 RRP8O43159 456 aaKnown RBP5.3□□□□□ -1.56
VPS50-205ENST00000441602 GFRA3O60609 400 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 BPNT1O95861 308 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 SERPINA5P05154 406 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 ARSBP15848 533 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 ZNF32P17041 273 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 IGFBP3P17936 291 aaPredicted RBP5.3□□□□□ -1.56
VPS50-205ENST00000441602 RAB6AP20340 208 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 PRKACBP22694 351 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 HOXC12P31275 282 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 POU3F4P49335 361 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 MALLQ13021 153 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 CCDC92Q53HC0 331 aaPredicted RBP5.3□□□□□ -1.56
VPS50-205ENST00000441602 TSPO2Q5TGU0 170 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 KRT74Q7RTS7 529 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 CDH24Q86UP0 819 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 WDFY1Q8IWB7 410 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 TUSC5Q8IXB3 177 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 SNRNP27Q8WVK2 155 aaKnown RBP5.3□□□□□ -1.56
VPS50-205ENST00000441602 ORAI1Q96D31 301 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 OR2H1Q9GZK4 316 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 OPA3Q9H6K4 179 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 PCDHB16Q9NRJ7 776 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 RBFOX1Q9NWB1 397 aaKnown RBP5.3□□□□□ -1.56
VPS50-205ENST00000441602 GHRLQ9UBU3 117 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 LOC390937A0A1W2PQ73 354 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 OR14I1A6ND48 311 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 WNT11O96014 354 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 DHFRP00374 187 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ALDOBP05062 364 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ADRA2CP18825 462 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 MPGP29372 298 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 PTGER4P35408 488 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 MAGEB1P43366 347 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 SSBP1Q04837 148 aaKnown RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 MRPL49Q13405 166 aaKnown RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 MADCAM1Q13477 382 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 DYRK1AQ13627 763 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ARL6IP1Q15041 203 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 RSPO4Q2I0M5 234 aaPredicted RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 IGFL3Q6UXB1 125 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 GDPD3Q7L5L3 318 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 OR2W3Q7Z3T1 314 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 OR51A4Q8NGJ6 313 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 OR13C9Q8NGT0 318 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 SMIM4Q8WVI0 70 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 TECTBQ96PL2 329 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 URM1Q9BTM9 101 aaKnown RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 ATG5Q9H1Y0 275 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 METTL17Q9H7H0 456 aaPredicted RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 PNRC2Q9NPJ4 139 aaKnown RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 NPAP1Q9NZP6 1156 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 CACNG2Q9Y698 323 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 DCDC2BA2VCK2 349 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 SULT1C2O00338 296 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 DHRS3O75911 302 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 APLNRP35414 380 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 UCNP55089 124 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 CLDN12P56749 244 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 TAS2R20P59543 309 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 RIPPLY1Q0D2K3 151 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 GLYATL3Q5SZD4 288 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 DNAAF1Q8NEP3 725 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 OR51D1Q8NGF3 324 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 OR1J2Q8NGS2 313 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 PPP1R14AQ96A00 147 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ZC3HAV1LQ96H79 300 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms