RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ZNF799Q96GE5 643 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 C1QTNF5Q9BXJ0 243 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 G6PC2Q9NQR9 355 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 TMEM100Q9NV29 134 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 VNN3Q9NY84 501 aa16.76■□□□□ 0.27
SHROOM1-204ENST00000440118 LRRC30A6NM36 301 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 IQCF6A8MYZ5 107 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 J3QLI3 93 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 IFNL4K9M1U5 179 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 RGS9O75916 674 aaPredicted RBP16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 CST1P01037 141 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 GYPBP06028 91 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 GATA3P23771 443 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 RAD23AP54725 363 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 PGAP1Q75T13 922 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 MUC20Q8N307 709 aaPredicted RBP16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 ZNF418Q8TF45 676 aaPredicted RBP16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 MAP6Q96JE9 813 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 MEGF10Q96KG7 1140 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 DGCR6LQ9BY27 220 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 C1orf21Q9H246 121 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 GCM1Q9NP62 436 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 COMMD3-BMI1R4GMX3 469 aa16.75■□□□□ 0.27
SHROOM1-204ENST00000440118 IGHV3-64DA0A0J9YX35 117 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 F5H5P2 479 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 EBAG9O00559 213 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 E2F6O75461 281 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 T-ENOLP0DO92 83 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 IRF2P14316 349 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 EPHA1P21709 976 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 MDH2P40926 338 aaKnown RBP16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 ENTPD1P49961 510 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 GK3PQ14409 553 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 GK2Q14410 553 aaPredicted RBP16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 ZMYND11Q15326 602 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 TMEM155Q4W5P6 130 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 DCXRQ7Z4W1 244 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 OR4Q3Q8NH05 313 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 ZNF420Q8TAQ5 688 aaPredicted RBP16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 GIPC3Q8TF64 312 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 SLCO4A1Q96BD0 722 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 SLC30A2Q9BRI3 323 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 CHID1Q9BWS9 393 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 C7orf69Q9H7B7 122 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 PNRC2Q9NPJ4 139 aaKnown RBP16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 CENPMQ9NSP4 180 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 TAS2R1Q9NYW7 299 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 N6AMT1Q9Y5N5 214 aa16.74■□□□□ 0.27
SHROOM1-204ENST00000440118 DHRS12A0PJE2 317 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 GYG2O15488 501 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 HLA-DPB1P04440 258 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 ADRA2CP18825 462 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 BLVRAP53004 296 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 ZSCAN26Q16670 478 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 KRTAP27-1Q3LI81 207 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 DNAL1Q4LDG9 190 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 ESCO2Q56NI9 601 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 LYPD4Q6UWN0 246 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 COLCA1Q6ZS62 124 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 TRPM8Q7Z2W7 1104 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 MOGAT3Q86VF5 341 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 C1orf87Q8N0U7 546 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 NANPQ8TBE9 248 aa16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 RBM4Q9BWF3 364 aaKnown RBP16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 NOP16Q9Y3C1 178 aaKnown RBP16.73■□□□□ 0.27
SHROOM1-204ENST00000440118 GGT3PA6NGU5 568 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 H0YL77 283 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 TMEM178BH3BS89 294 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 MLNRO43193 412 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 RPS2P15880 293 aaKnown RBP16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 SPI1P17947 270 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 PAICSP22234 425 aaKnown RBP16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 POU1F1P28069 291 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 RBMXP38159 391 aaKnown RBP16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 SLC25A1P53007 311 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 DRAM2Q6UX65 266 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 SPATC1Q76KD6 591 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 C1QL2Q7Z5L3 287 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 NAA40Q86UY6 237 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 SPATA24Q86W54 205 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 BPIFB2Q8N4F0 458 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 IQCF1Q8N6M8 205 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 ZNF511Q8NB15 262 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 SLAMF6Q96DU3 332 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 SIGLEC11Q96RL6 698 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 FEVQ99581 238 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 NIPSNAP1Q9BPW8 284 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 TMPRSS13Q9BYE2 586 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 ZNF556Q9HAH1 456 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 PATZ1Q9HBE1 687 aaKnown RBP16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 DDX28Q9NUL7 540 aaKnown RBP16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 OR5V1Q9UGF6 321 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 DOCK11Q5JSL3 2073 aa16.72■□□□□ 0.27
SHROOM1-204ENST00000440118 AQP12BA6NM10 295 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 ZNF878C9JN71 531 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 HAX1O00165 279 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 ZNF593O00488 134 aaPredicted RBP16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 CYB5R3P00387 301 aaPredicted RBP16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 CLUP10909 449 aa16.71■□□□□ 0.27
SHROOM1-204ENST00000440118 HOXB6P17509 224 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms