RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 MRGPRFQ96AM1 343 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 MICU1Q9BPX6 476 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 NAA11Q9BSU3 229 aaPredicted RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 LAT2Q9GZY6 243 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 SLC2A8Q9NY64 477 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 NKX2-2O95096 273 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 SLC35G6P0C7Q6 338 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 RCC1P18754 421 aaPredicted RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 AGAP20933 346 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 HTR2CP28335 458 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 SERPINF1P36955 418 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 MGAT2Q10469 447 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 FAM53BQ14153 422 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 RNASE10Q5GAN6 216 aaKnown RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 ACER2Q5QJU3 275 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 CORO6Q6QEF8 472 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 ZSCAN4Q8NAM6 433 aaPredicted RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 NUBPLQ8TB37 319 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 SAT2Q96F10 170 aaPredicted RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 MPDZO75970 2070 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 TMEM235A6NFC5 223 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 TTLL8A6PVC2 850 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 H7C1C5 153 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 IGKV1D-16P01601 117 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 SMIM10L1P0DMW3 83 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 MYF5P13349 255 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 AKR1C4P17516 323 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 MAOAP21397 527 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 CPT2P23786 658 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 AKR1C3P42330 323 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 ID4P47928 161 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 CTXN1P60606 82 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 LCN6P62502 163 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 MOGAT2Q3SYC2 334 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 GLYATL3Q5SZD4 288 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 LRRC69Q6ZNQ3 347 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 STX12Q86Y82 276 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 ADAD2Q8NCV1 583 aaKnown RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 GPBAR1Q8TDU6 330 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 SMIM10Q96HG1 83 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 SMIM8Q96KF7 97 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 SYT4Q9H2B2 425 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 HEATR5AQ86XA9 2040 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 FITM1A5D6W6 292 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 EML2O95834 649 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 ERCC1P07992 297 aaPredicted RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 FBP1P09467 338 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 PRF1P14222 555 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 ARRB1P49407 418 aaPredicted RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 FAM76BQ5HYJ3 339 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 TMEM244Q5VVB8 128 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 ZNF585AQ6P3V2 769 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 TMPPEQ6ZT21 453 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 RNF44Q7L0R7 432 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 C17orf82Q86X59 251 aaPredicted RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 RCBTB1Q8NDN9 531 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 TMEM52Q8NDY8 209 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 AMELYQ99218 206 aa7.66□□□□□ -1.18
HPS4-206ENST00000439453 PAPOLGQ9BWT3 736 aaKnown RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 CGGBP1Q9UFW8 167 aaPredicted RBP7.66□□□□□ -1.18
HPS4-206ENST00000439453 A6NCN8 305 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 H0YIZ8 118 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 EFSO43281 561 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 CLN5O75503 358 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 STK17BO94768 372 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 DUS4LO95620 317 aaKnown RBP7.65□□□□□ -1.18
HPS4-206ENST00000439453 MT-ND4LP03901 98 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 CD5P06127 495 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 ZNF14P17017 642 aaPredicted RBP7.65□□□□□ -1.18
HPS4-206ENST00000439453 GRK6P43250 576 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 C1orf61Q13536 156 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 TMEM225Q6GV28 225 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 FAHD2BQ6P2I3 314 aaPredicted RBP7.65□□□□□ -1.18
HPS4-206ENST00000439453 ADGRE4PQ86SQ3 457 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 C10orf53Q8N6V4 93 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 OR4N2Q8NGD1 307 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 ADAMTS17Q8TE56 1095 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 FAHD2AQ96GK7 314 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 NMES1Q9C002 83 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 ASH2LQ9UBL3 628 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 SLC22A13Q9Y226 551 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 MRPS33Q9Y291 106 aaKnown RBP7.65□□□□□ -1.18
HPS4-206ENST00000439453 MRPS18BQ9Y676 258 aaKnown RBP7.65□□□□□ -1.18
HPS4-206ENST00000439453 LOC400499M0QZD8 3231 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 SPAARA0A1B0GVQ0 90 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 MSGN1A6NI15 193 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 C9JQL5 133 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 WRBO00258 174 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 GPR75O95800 540 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 GPANK1O95872 356 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 CEACAM1P13688 526 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 SLC6A9P48067 706 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 HGFACQ04756 655 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 FCRL6Q6DN72 434 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 FBXO42Q6P3S6 717 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 LRRC75AQ8NAA5 344 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 OR52R1Q8NGF1 315 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 TCTEX1D2Q8WW35 142 aa7.65□□□□□ -1.18
HPS4-206ENST00000439453 SLC39A7Q92504 469 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms