RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ZNF676Q8N7Q3 588 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 ZC3HAV1LQ96H79 300 aaKnown RBP17.95■□□□□ 0.46
CHD3-204ENST00000439235 WFIKKN1Q96NZ8 548 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 C1QTNF5Q9BXJ0 243 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 G6PC2Q9NQR9 355 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 NDUFB11Q9NX14 153 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 NPAP1Q9NZP6 1156 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 EIF3KQ9UBQ5 218 aaKnown RBP17.95■□□□□ 0.46
CHD3-204ENST00000439235 MYO7BQ6PIF6 2116 aa17.95■□□□□ 0.46
CHD3-204ENST00000439235 OR4C45A6NMZ5 311 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 PYCARD-AS1I3L0S3 204 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 J3QW42 95 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 UBCP0CG48 685 aaKnown RBP17.94■□□□□ 0.46
CHD3-204ENST00000439235 CCL2P13500 99 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 PSMA1P25786 263 aaKnown RBP17.94■□□□□ 0.46
CHD3-204ENST00000439235 GRNP28799 593 aaKnown RBP17.94■□□□□ 0.46
CHD3-204ENST00000439235 KIR3DL2P43630 455 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 HGFACQ04756 655 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 TRAM1Q15629 374 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 SSX1Q16384 188 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 SEZ6L2Q6UXD5 910 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 UNQ6126/PRO20091Q6UXV3 157 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 PRSS45Q7RTY3 260 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 MYPOPQ86VE0 399 aaPredicted RBP17.94■□□□□ 0.46
CHD3-204ENST00000439235 OR8B12Q8NGG6 310 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 OR5AK2Q8NH90 309 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 TMIGD2Q96BF3 282 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 PGLYRP3Q96LB9 341 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 KCNS3Q9BQ31 491 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 OR10A2Q9H208 303 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 SLC22A13Q9Y226 551 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 N6AMT1Q9Y5N5 214 aa17.94■□□□□ 0.46
CHD3-204ENST00000439235 TBX1O43435 398 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 ZFPL1O95159 310 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 THBDP07204 575 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 CD36P16671 472 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 GABRA5P31644 462 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 TMEM108Q6UXF1 575 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 SATL1Q86VE3 508 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 MS4A15Q8N5U1 240 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 GHSRQ92847 366 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 APOBEC3DQ96AK3 386 aaPredicted RBP17.93■□□□□ 0.46
CHD3-204ENST00000439235 YIPF6Q96EC8 236 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 NPDC1Q9NQX5 325 aaPredicted RBP17.93■□□□□ 0.46
CHD3-204ENST00000439235 TBCCD1Q9NVR7 557 aa17.93■□□□□ 0.46
CHD3-204ENST00000439235 TUBAL3A6NHL2 446 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 ICMTO60725 284 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 CRYAAP02489 173 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 TTRP02766 147 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 TGFBR2P37173 567 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 NAAAQ02083 359 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 TIMM50Q3ZCQ8 353 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 TMEM244Q5VVB8 128 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 COLCA1Q6ZS62 124 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 C22orf34Q6ZV56 151 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 NAA40Q86UY6 237 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 PDCD1LG2Q9BQ51 273 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 RGCCQ9H4X1 137 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 ZNF391Q9UJN7 358 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 ZNF281Q9Y2X9 895 aa17.92■□□□□ 0.46
CHD3-204ENST00000439235 CFAP46Q8IYW2 2715 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 IGHV2OR16-5A0A0B4J2B6 119 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 A0A0U1RQV5 110 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 WIPF3A6NGB9 483 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 J3QKU1 62 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 XRCC2O43543 280 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 ISG15P05161 165 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 ZNF35P13682 527 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 ACHEP22303 614 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 PTAFRP25105 342 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 PCSK6P29122 969 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 WNT5AP41221 380 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 RPS25P62851 125 aaKnown RBP17.91■□□□□ 0.46
CHD3-204ENST00000439235 MALLQ13021 153 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 YIF1BQ5BJH7 314 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 COMMD2Q86X83 199 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 PAQR4Q8N4S7 273 aaPredicted RBP17.91■□□□□ 0.46
CHD3-204ENST00000439235 OR5L1Q8NGL2 311 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 LINC01560Q8TB33 94 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 DACH2Q96NX9 599 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 TMED9Q9BVK6 235 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 SLC24A3Q9HC58 644 aa17.91■□□□□ 0.46
CHD3-204ENST00000439235 A0A1B0GVI7 797 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 LOC107986453A0A1B0GWG9 222 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 SERPINA3P01011 423 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 HLA-DPB1P04440 258 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 EPXP11678 715 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 CFL1P23528 166 aaKnown RBP17.9■□□□□ 0.46
CHD3-204ENST00000439235 CD40P25942 277 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 ODF4Q2M2E3 257 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 SNAI3Q3KNW1 292 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 GPR148Q8TDV2 347 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 AKAP1Q92667 903 aaKnown RBP eCLIP17.9■□□□□ 0.46
CHD3-204ENST00000439235 THRSPQ92748 146 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 PPP1R14AQ96A00 147 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 FUNDC2Q9BWH2 189 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 OPA3Q9H6K4 179 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 BATF3Q9NR55 127 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 HHLA2Q9UM44 414 aa17.9■□□□□ 0.46
CHD3-204ENST00000439235 STUB1Q9UNE7 303 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms