RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 CDH10Q9Y6N8 788 aa15.5■□□□□ 0.07
AC004540.1-201ENST00000439120 A8MXK9 166 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 TNFRSF11BO00300 401 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 MLNRO43193 412 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 HLA-DPB1P04440 258 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 CPT2P23786 658 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 PRSS12P56730 875 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 GNB2P62879 340 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 GK2Q14410 553 aaPredicted RBP15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 BTNL3Q6UXE8 466 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 COLCA1Q6ZS62 124 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 NLRC3Q7RTR2 1065 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 OR9Q2Q8NGE9 314 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 OR11L1Q8NGX0 322 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 OR2T4Q8NH00 348 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 SLCO4A1Q96BD0 722 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 PLEKHA8Q96JA3 519 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 TBC1D23Q9NUY8 699 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 MIOXQ9UGB7 285 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 NOP16Q9Y3C1 178 aaKnown RBP15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 PPIAL4AQ9Y536 164 aa15.49■□□□□ 0.07
AC004540.1-201ENST00000439120 TMEM89A2RUT3 159 aa15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 M0R135 149 aa15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 PYCR1P32322 319 aa15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 GGT2P36268 569 aa15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 COMPP49747 757 aaPredicted RBP15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 ZNF181Q2M3W8 571 aa15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 RSPO1Q2MKA7 263 aaPredicted RBP15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 KRTAP27-1Q3LI81 207 aa15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 CYB561A3Q8NBI2 242 aa15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 ZNF799Q96GE5 643 aa15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 MRPL22Q9NWU5 206 aaKnown RBP15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 ACTR3BQ9P1U1 418 aa15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 LYVE1Q9Y5Y7 322 aa15.48■□□□□ 0.07
AC004540.1-201ENST00000439120 CCNB2O95067 398 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 WNT2P09544 360 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 GYS2P54840 703 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 UBA52P62987 128 aaKnown RBP15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 OR8G1Q15617 311 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 PIGWQ7Z7B1 504 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 NAA40Q86UY6 237 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 KLBQ86Z14 1044 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 SIGLECL1Q8N7X8 197 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 ZDHHC22Q8N966 263 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 OR8B3Q8NGG8 313 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 OR4C15Q8NGM1 316 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 DVL3Q92997 716 aaPredicted RBP15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 ZMYND19Q96E35 227 aaPredicted RBP15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 NEIL1Q96FI4 390 aaPredicted RBP15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 OR8B2Q96RD0 313 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 BTBD10Q9BSF8 475 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 TRIM15Q9C019 465 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 TMEM165Q9HC07 324 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 PNRC2Q9NPJ4 139 aaKnown RBP15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 ESM1Q9NQ30 184 aa15.47■□□□□ 0.07
AC004540.1-201ENST00000439120 TVP23AA6NH52 213 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 BHLHE40O14503 412 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 HMGA2P52926 109 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 TAF13Q15543 124 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 ZNF404Q494X3 552 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 LRRN1Q6UXK5 716 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 CELF2-AS1Q8N7Q2 184 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 AQP11Q8NBQ7 271 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 ERGIC1Q969X5 290 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 MAP6Q96JE9 813 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 TMEM246Q9BRR3 403 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 COPS4Q9BT78 406 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 MS4A7Q9GZW8 240 aaPredicted RBP15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 SLC22A4Q9H015 551 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 IL20Q9NYY1 176 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 ZNF69Q9UC07 566 aa15.46■□□□□ 0.07
AC004540.1-201ENST00000439120 GGT3PA6NGU5 568 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 GASTP01350 101 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 SPARCP09486 303 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 ATP6V1B2P21281 511 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 FMO3P31513 532 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 RPS27P42677 84 aaKnown RBP15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 GATA4P43694 442 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 PITPNBP48739 271 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 RASSF6Q6ZTQ3 369 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 DCXRQ7Z4W1 244 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 SLC37A3Q8NCC5 494 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 OR51L1Q8NGJ5 315 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 OR9Q1Q8NGQ5 310 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 ADAT1Q9BUB4 502 aaKnown RBP15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 TSSK6Q9BXA6 273 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 PLA2G12AQ9BZM1 189 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 MUC13Q9H3R2 512 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 REEP1Q9H902 201 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 FN3KRPQ9HA64 309 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 UFSP2Q9NUQ7 469 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 BAIAP2Q9UQB8 552 aa15.45■□□□□ 0.06
AC004540.1-201ENST00000439120 IGHV2-70DA0A0C4DH43 119 aa15.44■□□□□ 0.06
AC004540.1-201ENST00000439120 A0A1B0GWJ7 208 aa15.44■□□□□ 0.06
AC004540.1-201ENST00000439120 B2RBV5 119 aa15.44■□□□□ 0.06
AC004540.1-201ENST00000439120 FSTL3O95633 263 aa15.44■□□□□ 0.06
AC004540.1-201ENST00000439120 CA6P23280 308 aa15.44■□□□□ 0.06
AC004540.1-201ENST00000439120 CD80P33681 288 aa15.44■□□□□ 0.06
AC004540.1-201ENST00000439120 CD200P41217 278 aa15.44■□□□□ 0.06
AC004540.1-201ENST00000439120 BAMBIQ13145 260 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms