RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 CHMP1BQ7LBR1 199 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 CPT1CQ8TCG5 803 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 LIN7BQ9HAP6 207 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 GPR35Q9HC97 309 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 PAQR5Q9NXK6 330 aaPredicted RBP18.55■□□□□ 0.56
PTPRF-207ENST00000436724 ABRACLQ9P1F3 81 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 ALG5Q9Y673 324 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 ANXA2P2A6NMY6 339 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 LANCL1O43813 399 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 ANXA2P07355 339 aaKnown RBP18.55■□□□□ 0.56
PTPRF-207ENST00000436724 UBCP0CG48 685 aaKnown RBP18.55■□□□□ 0.56
PTPRF-207ENST00000436724 ACHEP22303 614 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 MRPS15P82914 257 aaKnown RBP18.55■□□□□ 0.56
PTPRF-207ENST00000436724 CD83Q01151 205 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 CDK10Q15131 360 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 TMEM244Q5VVB8 128 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 NOXA1Q86UR1 476 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 UPRTQ96BW1 309 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 FOXB1Q99853 325 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 MARVELD1Q9BSK0 173 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 SOX7Q9BT81 388 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 WACQ9BTA9 647 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 SLC7A10Q9NS82 523 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 TAS2R4Q9NYW5 299 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 ACACAQ13085 2346 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 C5orf63A6NC05 138 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 E9PLN8 166 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 KRT33AO76009 404 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 TGM6O95932 706 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 NPR2P20594 1047 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 ZNF283Q8N7M2 679 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 OR51E1Q8TCB6 317 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 SLCO5A1Q9H2Y9 848 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 PLEK2Q9NYT0 353 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 F5H5K5 113 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 CD2P06729 351 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 DBHP09172 617 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 CPN1P15169 458 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 HIST1H3AP68431 136 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 RSPO1Q2MKA7 263 aaPredicted RBP18.54■□□□□ 0.56
PTPRF-207ENST00000436724 RIPPLY2Q5TAB7 128 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 HIST2H3PS2Q5TEC6 136 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 C9orf135Q5VTT2 229 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 HIST2H3AQ71DI3 136 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 LUZP2Q86TE4 346 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 PLPP7Q8NBV4 271 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 OR8B12Q8NGG6 310 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 OR51A2Q8NGJ7 313 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 NIPAL2Q9H841 368 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 PLSCR3Q9NRY6 295 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 EMC3Q9P0I2 261 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 SPATA2Q9UM82 520 aa18.54■□□□□ 0.56
PTPRF-207ENST00000436724 ADRB1P08588 477 aa18.53■□□□□ 0.56
PTPRF-207ENST00000436724 ZNF57Q68EA5 555 aaPredicted RBP18.53■□□□□ 0.56
PTPRF-207ENST00000436724 FAM57BQ71RH2 274 aa18.53■□□□□ 0.56
PTPRF-207ENST00000436724 SNIP1Q8TAD8 396 aaKnown RBP18.53■□□□□ 0.56
PTPRF-207ENST00000436724 FGFBP3Q8TAT2 258 aa18.53■□□□□ 0.56
PTPRF-207ENST00000436724 BCO1Q9HAY6 547 aa18.53■□□□□ 0.56
PTPRF-207ENST00000436724 PDGFAP04085 211 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 S100A1P23297 94 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 INPP1P49441 399 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 FOXG1P55316 489 aaPredicted RBP18.52■□□□□ 0.56
PTPRF-207ENST00000436724 GRB2P62993 217 aaKnown RBP18.52■□□□□ 0.56
PTPRF-207ENST00000436724 GFOD2Q3B7J2 385 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 ELFN2Q5R3F8 820 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 SLC22A24Q8N4F4 322 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 THRSPQ92748 146 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 A0A1B0GTI1 187 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 SYT7O43581 403 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 YES1P07947 543 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 TALDO1P37837 337 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 NUFIP2Q7Z417 695 aaKnown RBP18.52■□□□□ 0.56
PTPRF-207ENST00000436724 FGGYQ96C11 551 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 THAP7Q9BT49 309 aaPredicted RBP18.52■□□□□ 0.56
PTPRF-207ENST00000436724 HDHD2Q9H0R4 259 aa18.52■□□□□ 0.56
PTPRF-207ENST00000436724 PCDHGA9Q9Y5G4 932 aaKnown RBP18.52■□□□□ 0.56
PTPRF-207ENST00000436724 K7EM74 188 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 IGHG3P01860 377 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 SLC6A9P48067 706 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 GPR176Q14439 515 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 Q5BKY6 102 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 PRSS45Q7RTY3 260 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 ABHD12BQ7Z5M8 362 aaPredicted RBP18.51■□□□□ 0.55
PTPRF-207ENST00000436724 COMMD2Q86X83 199 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 MCEMP1Q8IX19 187 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 ZADH2Q8N4Q0 377 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 ASCC1Q8N9N2 400 aaKnown RBP18.51■□□□□ 0.55
PTPRF-207ENST00000436724 TAAR6Q96RI8 345 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 ABHD1Q96SE0 405 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 TMEM246Q9BRR3 403 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 ZNF275Q9NSD4 429 aaPredicted RBP18.51■□□□□ 0.55
PTPRF-207ENST00000436724 PARPBPQ9NWS1 579 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 OR5V1Q9UGF6 321 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 ITGA5P08648 1049 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 ZNF32P17041 273 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 IGFBP3P17936 291 aaPredicted RBP18.51■□□□□ 0.55
PTPRF-207ENST00000436724 PITPNBP48739 271 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 RNPS1Q15287 305 aaKnown RBP18.51■□□□□ 0.55
PTPRF-207ENST00000436724 ZNF774Q6NX45 483 aa18.51■□□□□ 0.55
PTPRF-207ENST00000436724 SKA3Q8IX90 412 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms