RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ZYG11BQ9C0D3 744 aa3.26□□□□□ -1.89
HMGB1P45-201ENST00000435986 OR51J1Q9H342 316 aa3.26□□□□□ -1.89
HMGB1P45-201ENST00000435986 C1orf109Q9NX04 203 aa3.26□□□□□ -1.89
HMGB1P45-201ENST00000435986 YARS2Q9Y2Z4 477 aaKnown RBP3.26□□□□□ -1.89
HMGB1P45-201ENST00000435986 TBL2Q9Y4P3 447 aaKnown RBP3.26□□□□□ -1.89
HMGB1P45-201ENST00000435986 POLR3HQ9Y535 204 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P45-201ENST00000435986 TIMM22Q9Y584 194 aa3.26□□□□□ -1.89
HMGB1P45-201ENST00000435986 V9GYQ6 96 aa3.26□□□□□ -1.89
HMGB1P45-201ENST00000435986 ZNF646O15015 1829 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P45-201ENST00000435986 MAP3K5Q99683 1374 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 UBN2Q6ZU65 1347 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 A0A0B4J2A0 478 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 RBMY1BA6NDE4 496 aaKnown RBP3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 RBMY1EA6NEQ0 496 aaKnown RBP3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 TMEM114B3SHH9 223 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 H0YJX3 145 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 H3BNH8 94 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 M0QXV9 152 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 PPP1R2P9O14990 202 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 CIAO1O76071 339 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 SUPT7LO94864 414 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 RCBTB2O95199 551 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 FABP1P07148 127 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 GP1BAP07359 652 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 RBMY1DP0C7P1 496 aaKnown RBP3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 RBMY1A1P0DJD3 496 aaKnown RBP3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 CALM1P0DP23 149 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 CALM2P0DP24 149 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 CALM3P0DP25 149 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 MGMTP16455 207 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 PRPS1L1P21108 318 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 MAS1LP35410 378 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 ARR3P36575 388 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 RANBP1P43487 201 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 KIR3DL2P43630 455 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 CSNK1A1P48729 337 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 GNG10P50151 68 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 CRISP1P54107 249 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 ARF6P62330 175 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 PDIA2Q13087 525 aaKnown RBP3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 TMED2Q15363 201 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 ALX1Q15699 326 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 GABRA6Q16445 453 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 RPEL1Q2QD12 228 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 NDUFAF6Q330K2 333 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 COX19Q49B96 90 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 ACTBL2Q562R1 376 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 PIGGQ5H8A4 983 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 IDNKQ5T6J7 187 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 ZNF620Q6ZNG0 422 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 SLC25A48Q6ZT89 311 aaKnown RBP3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 SSX7Q7RTT5 188 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 PRSS41Q7RTY9 318 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 ZNF547Q8IVP9 402 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 CMTM1Q8IZ96 169 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 CEND1Q8N111 149 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 C6orf223Q8N319 242 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 OR8K1Q8NGG5 319 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 ACER1Q8TDN7 264 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 RBBP8Q99708 897 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 SH3GL3Q99963 347 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 BEX2Q9BXY8 128 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 OR11A1Q9GZK7 315 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 NAA50Q9GZZ1 169 aaKnown RBP3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 RNF167Q9H6Y7 350 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 BEX1Q9HBH7 125 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 RMND1Q9NWS8 449 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 TAS2R9Q9NYW1 312 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 CALYQ9NYX4 217 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 SHPKQ9UHJ6 478 aa3.25□□□□□ -1.89
HMGB1P45-201ENST00000435986 C12orf77C9JDV5 145 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 SULT1C2O00338 296 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 XKRYO14609 159 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 SLC31A2O15432 143 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 SGCEO43556 437 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 FAM189A1O60320 539 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 EIF4E2O60573 245 aaKnown RBP3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 C1orf105O95561 183 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 CD160O95971 181 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 IGHV2-5P01817 119 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 RHOCP08134 193 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 CD1EP15812 388 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 RAB4AP20338 218 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 CFL1P23528 166 aaKnown RBP3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 PSMB5P28074 263 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 GTF2H1P32780 548 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 NBL1P41271 181 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 GPR6P46095 362 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 GTF2A1P52655 376 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 SUB1P53999 127 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 CXCR4P61073 352 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 S100A12P80511 92 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 BNIP2Q12982 314 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 PDK2Q15119 407 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 SF3A2Q15428 464 aaKnown RBP3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 ZBTB6Q15916 424 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 ATP6V1FQ16864 119 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 IMPG1Q17R60 797 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 SLC36A2Q495M3 483 aa3.24□□□□□ -1.89
HMGB1P45-201ENST00000435986 LRRC10Q5BKY1 277 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms