RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 TMEM100Q9NV29 134 aa12.02□□□□□ -0.49
LINC01006-204ENST00000435354 DNAJC9-AS1A6NH13 148 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 FSTL3O95633 263 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 HLA-DQA2P01906 255 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 PSKH1P11801 424 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 RPS2P15880 293 aaKnown RBP12.01□□□□□ -0.49
LINC01006-204ENST00000435354 EGR1P18146 543 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 NOS3P29474 1203 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 PYCR1P32322 319 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 IFNGR2P38484 337 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC01006-204ENST00000435354 MAB21L1Q13394 359 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 ZNF404Q494X3 552 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 AWAT1Q58HT5 328 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 CLEC12AQ5QGZ9 265 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 ZNF362Q5T0B9 420 aaPredicted RBP12.01□□□□□ -0.49
LINC01006-204ENST00000435354 LYPD4Q6UWN0 246 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 ZDHHC21Q8IVQ6 265 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 OR2AJ1Q8NGZ0 328 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 GNPDA2Q8TDQ7 276 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 ZNRF4Q8WWF5 429 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 DUX5Q96PT3 197 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 EGLN3Q9H6Z9 239 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 DDX28Q9NUL7 540 aaKnown RBP12.01□□□□□ -0.49
LINC01006-204ENST00000435354 TAGLN3Q9UI15 199 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 TMCC3Q9ULS5 477 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 LYVE1Q9Y5Y7 322 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 CDH10Q9Y6N8 788 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 MGAM2Q2M2H8 2515 aa12.01□□□□□ -0.49
LINC01006-204ENST00000435354 C5orf63A6NC05 138 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 BHLHE40O14503 412 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 LCATP04180 440 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 IGHV4-38-2P0DP08 117 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 CPT2P23786 658 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 RPS27P42677 84 aaKnown RBP12□□□□□ -0.49
LINC01006-204ENST00000435354 GATA4P43694 442 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 HMGA2P52926 109 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 RAD23AP54725 363 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 HOXA4Q00056 320 aaPredicted RBP12□□□□□ -0.49
LINC01006-204ENST00000435354 ZNF770Q6IQ21 691 aaPredicted RBP12□□□□□ -0.49
LINC01006-204ENST00000435354 RBMS3Q6XE24 437 aaKnown RBP12□□□□□ -0.49
LINC01006-204ENST00000435354 CPLX4Q7Z7G2 160 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 CYB561A3Q8NBI2 242 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 OR9Q2Q8NGE9 314 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 OR8D4Q8NGM9 314 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 SLCO4A1Q96BD0 722 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 NEIL1Q96FI4 390 aaPredicted RBP12□□□□□ -0.49
LINC01006-204ENST00000435354 BTBD10Q9BSF8 475 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 CDADC1Q9BWV3 514 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 NSRP1Q9H0G5 558 aaKnown RBP12□□□□□ -0.49
LINC01006-204ENST00000435354 MIOXQ9UGB7 285 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 KCNG2Q9UJ96 466 aa12□□□□□ -0.49
LINC01006-204ENST00000435354 SOX21Q9Y651 276 aaPredicted RBP12□□□□□ -0.49
LINC01006-204ENST00000435354 IGHV3OR16-10A0A075B7F0 116 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 IGHV2-70DA0A0C4DH43 119 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 TVP23AA6NH52 213 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 LRRC30A6NM36 301 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 M0R135 149 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 ATP8B1O43520 1251 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 FAM20BO75063 409 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 HKR1P10072 659 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 ATP6V1B2P21281 511 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 PRTN3P24158 256 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 OTX1P32242 354 aaPredicted RBP11.99□□□□□ -0.49
LINC01006-204ENST00000435354 CD200P41217 278 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 GNB2P62879 340 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 MALLQ13021 153 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 MPPED2Q15777 294 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 SNAI3Q3KNW1 292 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 PRAMEF6Q5VXH4 476 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 LYPD2Q6UXB3 125 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 DEFB107AQ8IZN7 70 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 CELF2-AS1Q8N7Q2 184 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 OR4C15Q8NGM1 316 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 Q8TCH9 128 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 RAB40AQ8WXH6 277 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 UPRTQ96BW1 309 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 ZMYND19Q96E35 227 aaPredicted RBP11.99□□□□□ -0.49
LINC01006-204ENST00000435354 ZNF799Q96GE5 643 aa11.99□□□□□ -0.49
LINC01006-204ENST00000435354 CD300LBA8K4G0 201 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 KRT36O76013 467 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 PLATP00750 562 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 PPIAL4GP0DN37 164 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 CA6P23280 308 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 PITPNBP48739 271 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 GYS2P54840 703 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 TPTEP56180 551 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 ZNF92Q03936 586 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 SPATS1Q496A3 300 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 LRRN1Q6UXK5 716 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 CYP2R1Q6VVX0 501 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 C9orf139Q6ZV77 190 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 PGAP1Q75T13 922 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 MRPL21Q7Z2W9 205 aaKnown RBP11.98□□□□□ -0.49
LINC01006-204ENST00000435354 PIGWQ7Z7B1 504 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 C1orf87Q8N0U7 546 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 PARP8Q8N3A8 854 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 C19orf18Q8NEA5 215 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 PROKR2Q8NFJ6 384 aa11.98□□□□□ -0.49
LINC01006-204ENST00000435354 OR8B3Q8NGG8 313 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms