RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 LYRM7Q5U5X0 104 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 GKN2Q86XP6 184 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 C19orf47Q8N9M1 422 aaKnown RBP6.71□□□□□ -1.33
CPSF6-202ENST00000435070 NUS1Q96E22 293 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF426Q9BUY5 554 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 MEMO1Q9Y316 297 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 DNAH14Q0VDD8 3507 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF587BE7ETH6 402 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 ZNF16P17020 682 aaPredicted RBP6.71□□□□□ -1.33
CPSF6-202ENST00000435070 PAX6P26367 422 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 CRABP1P29762 137 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 APLNRP35414 380 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 EIPR1Q53HC9 387 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 DNM1P46Q6ZS02 220 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 FJX1Q86VR8 437 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 TMEM25Q86YD3 366 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 NPEPL1Q8NDH3 523 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 SLC39A7Q92504 469 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 MRPL37Q9BZE1 423 aaKnown RBP6.71□□□□□ -1.33
CPSF6-202ENST00000435070 CHRNA9Q9UGM1 479 aa6.71□□□□□ -1.33
CPSF6-202ENST00000435070 WDR90Q96KV7 1748 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 OR4C45A6NMZ5 311 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 CYB5BO43169 146 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 UPK3AO75631 287 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 CDKN2AP42771 156 aaKnown RBP6.71□□□□□ -1.34
CPSF6-202ENST00000435070 GRK6P43250 576 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 CAMLGP49069 296 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 EXOSC7Q15024 291 aaKnown RBP6.71□□□□□ -1.34
CPSF6-202ENST00000435070 NNATQ16517 81 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 SLC48A1Q6P1K1 146 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF550Q7Z398 422 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 FAM174AQ8TBP5 190 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 WDR76Q9H967 626 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 ICAM5Q9UMF0 924 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 RCL1Q9Y2P8 373 aaKnown RBP6.71□□□□□ -1.34
CPSF6-202ENST00000435070 PIAS3Q9Y6X2 628 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 VSTM5A8MXK1 200 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 RENP00797 406 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 CXCL1P09341 107 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 RNH1P13489 461 aaKnown RBP6.71□□□□□ -1.34
CPSF6-202ENST00000435070 BCL6P41182 706 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 MLC1Q15049 377 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 OR10C1Q96KK4 312 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 AMELYQ99218 206 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 MESP1Q9BRJ9 268 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 PPIL1Q9Y3C6 166 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 YIPF1Q9Y548 306 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 OR5H15A6NDH6 313 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 OR5H1A6NKK0 313 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 P2RX6O15547 441 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST1H2BKO60814 126 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST1H2BJP06899 126 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST1H2BOP23527 126 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST1H2BBP33778 126 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST1H2BDP58876 126 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST1H2BCP62807 126 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST2H2BEQ16778 126 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 SOHLH1Q5JUK2 328 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 SPIN3Q5JUX0 258 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.71□□□□□ -1.34
CPSF6-202ENST00000435070 FCRL6Q6DN72 434 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 OR2L8Q8NGY9 312 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 SFXN5Q8TD22 340 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST1H2BHQ93079 126 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST1H2BNQ99877 126 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HIST1H2BMQ99879 126 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 PRRT1Q99946 306 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 SIRT7Q9NRC8 400 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 KLRF1Q9NZS2 232 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 JMJD7P0C870 316 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 GABRA3P34903 492 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 NPAS4Q8IUM7 802 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 KDF1Q8NAX2 398 aaPredicted RBP6.71□□□□□ -1.34
CPSF6-202ENST00000435070 OR10AD1Q8NGE0 317 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 OR9K2Q8NGE7 335 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 RNF166Q96A37 237 aaPredicted RBP6.71□□□□□ -1.34
CPSF6-202ENST00000435070 NTNG2Q96CW9 530 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.71□□□□□ -1.34
CPSF6-202ENST00000435070 TAS2R4Q9NYW5 299 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 LSM5Q9Y4Y9 91 aaKnown RBP6.71□□□□□ -1.34
CPSF6-202ENST00000435070 HS3ST3B1Q9Y662 390 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 THSD7AQ9UPZ6 1657 aa6.71□□□□□ -1.34
CPSF6-202ENST00000435070 VWA8A3KMH1 1905 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 TGIF2-C20orf24A0A0A6YYL0 155 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 SEC14L6B5MCN3 397 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 FAM157AC9JC47 383 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 APOA2P02652 100 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 NID1P14543 1247 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 TOMM34Q15785 309 aaPredicted RBP6.7□□□□□ -1.34
CPSF6-202ENST00000435070 ALG10Q5BKT4 473 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 HEPN1Q6WQI6 88 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 FIBINQ8TAL6 211 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 MRGPRFQ96AM1 343 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 ASB16Q96NS5 453 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 NUDT9Q9BW91 350 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 NELFAQ9H3P2 528 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 ENY2Q9NPA8 101 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 SLC2A8Q9NY64 477 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 SLC17A2O00624 439 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF207O43670 478 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms