RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TMEM272A0A1B0GTI8 110 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.6□□□□□ -1.35
COL17A1-204ENST00000433822 TMEM269A0A1B0GVZ9 245 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 LOC107986453A0A1B0GWG9 222 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 A0A1W2PQM1 296 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 METTL21EPA6NDL7 271 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF878C9JN71 531 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 G3V3Q6 166 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 TP53I11O14683 189 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 ARPC1BO15143 372 aaKnown RBP6.6□□□□□ -1.35
COL17A1-204ENST00000433822 DNPH1O43598 174 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 TRAF3IP2O43734 574 aaPredicted RBP6.6□□□□□ -1.35
COL17A1-204ENST00000433822 SSNA1O43805 119 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 SLC22A5O76082 557 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 PMS2P2O95744 297 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 BPNT1O95861 308 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 IGHEP01854 428 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 IGHG1P01857 330 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 HPXP02790 462 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 H2BFMP0C1H6 154 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 SP9P0CG40 484 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 PGA4P0DJD7 388 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 PGA3P0DJD8 388 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 LAP3P28838 519 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 HTR2BP41595 481 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 DUSP3P51452 185 aaPredicted RBP6.6□□□□□ -1.35
COL17A1-204ENST00000433822 P2RY4P51582 365 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 CLDN12P56749 244 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 FBXW4P57775 412 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 LSM6P62312 80 aaKnown RBP6.6□□□□□ -1.35
COL17A1-204ENST00000433822 SRSF4Q08170 494 aaKnown RBP6.6□□□□□ -1.35
COL17A1-204ENST00000433822 MFGE8Q08431 387 aaPredicted RBP6.6□□□□□ -1.35
COL17A1-204ENST00000433822 FOXF1Q12946 379 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 MEF2DQ14814 521 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 OR7A5Q15622 319 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 EXT1Q16394 746 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 HIST3H3Q16695 136 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 PCGF3Q3KNV8 242 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 TMEM255AQ5JRV8 349 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 OR7E24Q6IFN5 339 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 FAHD2BQ6P2I3 314 aaPredicted RBP6.6□□□□□ -1.35
COL17A1-204ENST00000433822 SLC25A47Q6Q0C1 308 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF813Q6ZN06 617 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 FOXL2NBQ6ZUU3 175 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 NLRC3Q7RTR2 1065 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 OR2W3Q7Z3T1 314 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 DCXRQ7Z4W1 244 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 SERPINA12Q8IW75 414 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 UEVLDQ8IX04 471 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 IZUMO1Q8IYV9 350 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF680Q8NEM1 530 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 OR10H5Q8NGA6 315 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 OR51D1Q8NGF3 324 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 OR4C16Q8NGL9 310 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 C10orf35Q96D05 121 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 ORAI1Q96D31 301 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 FAHD2AQ96GK7 314 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 ARL5BQ96KC2 179 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 OXGR1Q96P68 337 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 OR6C1Q96RD1 312 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 EDEM2Q9BV94 578 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 OR11A1Q9GZK7 315 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF700Q9H0M5 742 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 METTL17Q9H7H0 456 aaPredicted RBP6.6□□□□□ -1.35
COL17A1-204ENST00000433822 PTGES2Q9H7Z7 377 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 TMEM138Q9NPI0 162 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 B3GAT1Q9P2W7 334 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 PILRBQ9UKJ0 227 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 SLC22A13Q9Y226 551 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 SIT1Q9Y3P8 196 aa6.6□□□□□ -1.35
COL17A1-204ENST00000433822 FREM2Q5SZK8 3169 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 A0A1B0GTH9 108 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 PLSCR5A0PG75 271 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 AQP7P3A6NL99 342 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 H3BUI4 141 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 NTN3O00634 580 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 TLX3O43711 291 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 EIF1BO60739 113 aaKnown RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF354AO60765 605 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 NOS1APO75052 506 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 VAMP5O95183 116 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 PLGP00747 810 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 CHRM2P08172 466 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 UBBP0CG47 229 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 TDGF1P13385 188 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF17P17021 662 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 HLA-GP17693 338 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 BDKRB2P30411 391 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 CALCRP30988 508 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 ALDH3B1P43353 468 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 MAGEB1P43366 347 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 DNASE1L1P49184 302 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 RPS15P62841 145 aaKnown RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 SLC35A1P78382 337 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 CCL7P80098 99 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 H3F3AP84243 136 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 POU3F1Q03052 451 aaPredicted RBP6.59□□□□□ -1.35
COL17A1-204ENST00000433822 MYBPHQ13203 477 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 MELKQ14680 651 aa6.59□□□□□ -1.35
COL17A1-204ENST00000433822 ZNF528Q3MIS6 628 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms