RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 ITIH4Q14624 930 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 DUX4L9Q6RFH8 374 aaPredicted RBP4.01□□□□□ -1.77
USP54-206ENST00000433394 LYPD2Q6UXB3 125 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 LINC01551Q86U37 167 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 APRG1Q8IVJ8 170 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 MYOCDQ8IZQ8 938 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 CHST4Q8NCG5 386 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 OR10J6PQ8NGY7 276 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 TM4SF18Q96CE8 201 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 CCDC94Q9BW85 323 aaPredicted RBP4.01□□□□□ -1.77
USP54-206ENST00000433394 CALN1Q9BXU9 219 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 SLC25A39Q9BZJ4 359 aaPredicted RBP4.01□□□□□ -1.77
USP54-206ENST00000433394 IL22Q9GZX6 179 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 BEX1Q9HBH7 125 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 AGPAT4Q9NRZ5 378 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 AHSPQ9NZD4 102 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 DUX4Q9UBX2 424 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 STRCQ7RTU9 1775 aa4.01□□□□□ -1.77
USP54-206ENST00000433394 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.01□□□□□ -1.77
USP54-206ENST00000433394 USP54Q70EL1 1684 aa4□□□□□ -1.77
USP54-206ENST00000433394 KIF20BQ96Q89 1820 aa4□□□□□ -1.77
USP54-206ENST00000433394 UBN2Q6ZU65 1347 aa4□□□□□ -1.77
USP54-206ENST00000433394 IGHV3-74A0A0B4J1X5 117 aa4□□□□□ -1.77
USP54-206ENST00000433394 TSPAN11A1L157 253 aa4□□□□□ -1.77
USP54-206ENST00000433394 PLAC8L1A1L4L8 177 aa4□□□□□ -1.77
USP54-206ENST00000433394 TMX2-CTNND1H3BSU7 103 aa4□□□□□ -1.77
USP54-206ENST00000433394 AKR7A2O43488 359 aa4□□□□□ -1.77
USP54-206ENST00000433394 XRCC2O43543 280 aa4□□□□□ -1.77
USP54-206ENST00000433394 KRT16P08779 473 aa4□□□□□ -1.77
USP54-206ENST00000433394 PSG2P11465 335 aa4□□□□□ -1.77
USP54-206ENST00000433394 PRPS2P11908 318 aa4□□□□□ -1.77
USP54-206ENST00000433394 U2AF2P26368 475 aaKnown RBP eCLIP4□□□□□ -1.77
USP54-206ENST00000433394 UBE2NP61088 152 aaKnown RBP4□□□□□ -1.77
USP54-206ENST00000433394 ZNF33AQ06730 810 aa4□□□□□ -1.77
USP54-206ENST00000433394 CKAP4Q07065 602 aaKnown RBP4□□□□□ -1.77
USP54-206ENST00000433394 STK38Q15208 465 aa4□□□□□ -1.77
USP54-206ENST00000433394 POU2AF1Q16633 256 aa4□□□□□ -1.77
USP54-206ENST00000433394 UBE2SQ16763 222 aa4□□□□□ -1.77
USP54-206ENST00000433394 KRT71Q3SY84 523 aa4□□□□□ -1.77
USP54-206ENST00000433394 GPR107Q5VW38 600 aa4□□□□□ -1.77
USP54-206ENST00000433394 MBOAT2Q6ZWT7 520 aa4□□□□□ -1.77
USP54-206ENST00000433394 ABHD12BQ7Z5M8 362 aaPredicted RBP4□□□□□ -1.77
USP54-206ENST00000433394 ZNF547Q8IVP9 402 aa4□□□□□ -1.77
USP54-206ENST00000433394 C8orf31Q8N9H6 132 aa4□□□□□ -1.77
USP54-206ENST00000433394 SNX31Q8N9S9 440 aa4□□□□□ -1.77
USP54-206ENST00000433394 OR6Q1Q8NGQ2 317 aa4□□□□□ -1.77
USP54-206ENST00000433394 OR51E1Q8TCB6 317 aa4□□□□□ -1.77
USP54-206ENST00000433394 CA5BP1Q8WTZ4 195 aa4□□□□□ -1.77
USP54-206ENST00000433394 GIMAP1Q8WWP7 306 aa4□□□□□ -1.77
USP54-206ENST00000433394 GALNT14Q96FL9 552 aa4□□□□□ -1.77
USP54-206ENST00000433394 DUS3LQ96G46 650 aaKnown RBP4□□□□□ -1.77
USP54-206ENST00000433394 ZNF799Q96GE5 643 aa4□□□□□ -1.77
USP54-206ENST00000433394 CEP170P1Q96L14 293 aa4□□□□□ -1.77
USP54-206ENST00000433394 DYRK4Q9NR20 520 aa4□□□□□ -1.77
USP54-206ENST00000433394 MCUBQ9NWR8 336 aa4□□□□□ -1.77
USP54-206ENST00000433394 NEU3Q9UQ49 428 aa4□□□□□ -1.77
USP54-206ENST00000433394 PPIP5K1Q6PFW1 1433 aa4□□□□□ -1.77
USP54-206ENST00000433394 NALCNQ8IZF0 1738 aa4□□□□□ -1.77
USP54-206ENST00000433394 NOTCH3Q9UM47 2321 aa4□□□□□ -1.77
USP54-206ENST00000433394 A0A1W2PP64 1363 aa4□□□□□ -1.77
USP54-206ENST00000433394 IQSEC2Q5JU85 1478 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 CROCCQ5TZA2 2017 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 NSD3Q9BZ95 1437 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 IGHV3-66A0A0C4DH42 116 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 SYCE1LA8MT33 242 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 TPM3P06753 285 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 ERGP11308 486 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 MDKP21741 143 aaPredicted RBP3.99□□□□□ -1.77
USP54-206ENST00000433394 BCAP31P51572 246 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 P2RX1P51575 399 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 CCR6P51684 374 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 ZNF726P1Q15940 193 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 TSPO2Q5TGU0 170 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 OR5T3Q8NGG3 340 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 LRRC29Q8WV35 223 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 CERS2Q96G23 380 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 TMEM38AQ9H6F2 299 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 CLN6Q9NWW5 311 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 IFNKQ9P0W0 207 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 ZNF223Q9UK11 482 aaPredicted RBP3.99□□□□□ -1.77
USP54-206ENST00000433394 CFAP45Q9UL16 551 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 DDX19BQ9UMR2 479 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 WSB1Q9Y6I7 421 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 SCN2AQ99250 2005 aa3.99□□□□□ -1.77
USP54-206ENST00000433394 CD163L1Q9NR16 1453 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 NRKQ7Z2Y5 1582 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 A0A1B0GVY2 172 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 A6NDN8 102 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 SLC9A3R1O14745 358 aaPredicted RBP3.98□□□□□ -1.77
USP54-206ENST00000433394 FLOT1O75955 427 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 CD160O95971 181 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 HPRT1P00492 218 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 IGLV2-23P01705 113 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 UBTFL6P0CB48 400 aaPredicted RBP3.98□□□□□ -1.77
USP54-206ENST00000433394 RAB3AP20336 220 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 IL32P24001 234 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 CD82P27701 267 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 RFC3P40938 356 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 GPR1P46091 355 aa3.98□□□□□ -1.77
USP54-206ENST00000433394 CSNK1A1P48729 337 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms