RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 TMPRSS11FQ6ZWK6 438 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 MRPL41Q8IXM3 137 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PSMA8Q8TAA3 256 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 R3HDM4Q96D70 268 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CEP19Q96LK0 163 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 SLC6A7Q99884 636 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 OCSTAMPQ9BR26 566 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 OSBPL10Q9BXB5 764 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CNTD2Q9H8S5 307 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 MPC1Q9Y5U8 109 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CROCCQ5TZA2 2017 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ANKHD1Q8IWZ3 2542 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 FAM230AA0A1W2PPH8 454 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 LYNX1G3V0Z9 82 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 RPP14O95059 124 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 LYNX1P0DP58 116 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CA6P23280 308 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 IGFBP5P24593 272 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CDKN2CP42773 168 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CX3CR1P49238 355 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 BMXP51813 675 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ARF6P62330 175 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 GNG3P63215 75 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 RSU1Q15404 277 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 SPATS1Q496A3 300 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PLA1AQ53H76 456 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 MEPCEQ7L2J0 689 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PDZD9Q8IXQ8 264 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 SEMA6DQ8NFY4 1073 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 OR10AD1Q8NGE0 317 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 KLF14Q8TD94 323 aaPredicted RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 DUX5Q96PT3 197 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PCDHAC1Q9H158 963 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PPA2Q9H2U2 334 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 UNKLQ9H9P5 680 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PATZ1Q9HBE1 687 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PDP1Q9P0J1 537 aaPredicted RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 SLC25A10Q9UBX3 287 aaPredicted RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CDH10Q9Y6N8 788 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 DOPEY1Q5JWR5 2465 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 IGHV4-61A0A0C4DH41 118 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ZC3H12DA2A288 527 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CDAP32320 146 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CRYBB2P43320 205 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 GBX2P52951 348 aaPredicted RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 C16orf87Q6PH81 154 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 Q8IYB0 196 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 OR8G5Q8NG78 346 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ASB10Q8WXI3 467 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 EMG1Q92979 244 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 MS4A3Q96HJ5 214 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 REEP6Q96HR9 211 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PYURFQ96I23 114 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CNN2Q99439 309 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 APOL4Q9BPW4 351 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 WARS2Q9UGM6 360 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 SHISA9B4DS77 424 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ATP6V1B1P15313 513 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 NFYBP25208 207 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PRDX6P30041 224 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 TALDO1P37837 337 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 MDH1P40925 334 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 TFF3Q07654 80 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 LAPTM4AQ15012 233 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CXorf66Q5JRM2 361 aaPredicted RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CYP2R1Q6VVX0 501 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PTCHD4Q6ZW05 846 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 C1QL2Q7Z5L3 287 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 LINC00346Q8IVM7 164 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 AQP11Q8NBQ7 271 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 SDR9C7Q8NEX9 313 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 RNASE11Q8TAA1 199 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF596Q8TC21 504 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 MNTQ99583 582 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 OR52D1Q9H346 318 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PROK2Q9HC23 129 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 SCN3BQ9NY72 215 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 TVP23BQ9NYZ1 205 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 EMCNQ9ULC0 261 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 HIVEP3Q5T1R4 2406 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 TCRBV4S1A1TA0A5B7 111 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 SH2D1BO14796 132 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 MYL12BO14950 172 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 GPRIN2O60269 458 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ALX3O95076 343 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 CCDC159P0C7I6 412 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 TMEM225BP0DP42 221 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 PRTN3P24158 256 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ACAA2P42765 397 aaKnown RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 APOOLQ6UXV4 268 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 SEM1Q6ZVN7 128 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 SKA3Q8IX90 412 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 GTF2H4Q92759 462 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ITFG2Q969R8 447 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 C6orf62Q9GZU0 229 aaPredicted RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 HIPK2Q9H2X6 1198 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 VSX1Q9NZR4 365 aaPredicted RBP3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ING4Q9UNL4 249 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 LRP4O75096 1905 aa3.95□□□□□ -1.78
UBE4A-202ENST00000431736 ZNF816-ZNF321PA0A0X1KG74 233 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms