RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 OR51V1Q9H2C8 321 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 NARFLQ9H6Q4 476 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 SLC25A19Q9HC21 320 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 PAPOLBQ9NRJ5 636 aaKnown RBP8.32□□□□□ -1.08
HDAC6-207ENST00000430858 IL19Q9UHD0 177 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 WIPI2Q9Y4P8 454 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 AP4S1Q9Y587 144 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 NSD1Q96L73 2696 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-207ENST00000430858 CHD3Q12873 2000 aaKnown RBP8.31□□□□□ -1.08
HDAC6-207ENST00000430858 ZNF878C9JN71 531 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 WNT9BO14905 357 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 PRODHO43272 600 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 CIB2O75838 187 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 FAM157CP0CG43 387 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 PSKH1P11801 424 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 PCMT1P22061 227 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 SLC15A1P46059 708 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 CRISP1P54107 249 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 DVL1P1P54792 670 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-207ENST00000430858 LMO4P61968 165 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 ESRRGP62508 458 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 GRB2P62993 217 aaKnown RBP8.31□□□□□ -1.08
HDAC6-207ENST00000430858 EIF2B1Q14232 305 aaKnown RBP8.31□□□□□ -1.08
HDAC6-207ENST00000430858 GK2Q14410 553 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-207ENST00000430858 TAF13Q15543 124 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 SPRNQ5BIV9 151 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 SLC35D3Q5M8T2 416 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 AVPI1Q5T686 147 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 PLBD1Q6P4A8 553 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 PGAP1Q75T13 922 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 RHOUQ7L0Q8 258 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 ASRGL1Q7L266 308 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 MRPL21Q7Z2W9 205 aaKnown RBP8.31□□□□□ -1.08
HDAC6-207ENST00000430858 DPY19L4Q7Z388 723 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 NAA40Q86UY6 237 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 ZDHHC13Q8IUH4 622 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 ERI1Q8IV48 349 aaKnown RBP8.31□□□□□ -1.08
HDAC6-207ENST00000430858 TIGD4Q8IY51 512 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 ZNF283Q8N7M2 679 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 ST7LQ8TDW4 575 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 RAB39BQ96DA2 213 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 PLEKHA8Q96JA3 519 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 SLC30A2Q9BRI3 323 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 TOR3AQ9H497 397 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 ZNF665Q9H7R5 613 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 MED20Q9H944 212 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 MARCH7Q9H992 704 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 CENPMQ9NSP4 180 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 TMEM106BQ9NUM4 274 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 TMEM100Q9NV29 134 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 TREM2Q9NZC2 230 aa8.31□□□□□ -1.08
HDAC6-207ENST00000430858 NF1P21359 2839 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 YLPM1P49750 1951 aaKnown RBP8.3□□□□□ -1.08
HDAC6-207ENST00000430858 A0A1B0GWJ7 208 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 FAM157AC9JC47 383 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 G3V2T6 193 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 IFNL4K9M1U5 179 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 APOC1P02654 83 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 MSMBP08118 114 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 SRP9P49458 86 aaKnown RBP8.3□□□□□ -1.08
HDAC6-207ENST00000430858 DAPP51397 102 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 PRKXP51817 358 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 SNAPC1Q16533 368 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 CR1LQ2VPA4 569 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 SNAI3Q3KNW1 292 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 KLHL12Q53G59 568 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 FAM120AOSQ5T036 256 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 TMEM236Q5W0B7 351 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 GLCCI1Q86VQ1 547 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 CPOQ8IVL8 374 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 BHLHE23Q8NDY6 225 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 OR51F2Q8NH61 342 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 RNF133Q8WVZ7 376 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 ITLN1Q8WWA0 313 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 OR2V2Q96R30 315 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 GAL3ST1Q99999 423 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 ABHD6Q9BV23 337 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 REPIN1Q9BWE0 567 aaKnown RBP8.3□□□□□ -1.08
HDAC6-207ENST00000430858 PRRG3Q9BZD7 231 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 SLC22A4Q9H015 551 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 OPA3Q9H6K4 179 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 SP140LQ9H930 580 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 PPP1R3CQ9UQK1 317 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 NOP16Q9Y3C1 178 aaKnown RBP8.3□□□□□ -1.08
HDAC6-207ENST00000430858 NPTNQ9Y639 398 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 ZANQ9Y493 2812 aa8.3□□□□□ -1.08
HDAC6-207ENST00000430858 SONP18583 2426 aaKnown RBP8.3□□□□□ -1.08
HDAC6-207ENST00000430858 ISPDA4D126 451 aa8.29□□□□□ -1.08
HDAC6-207ENST00000430858 GGT3PA6NGU5 568 aa8.29□□□□□ -1.08
HDAC6-207ENST00000430858 KIAA1324LA8MWY0 1029 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-207ENST00000430858 XRCC2O43543 280 aa8.29□□□□□ -1.08
HDAC6-207ENST00000430858 IGHV2-5P01817 119 aa8.29□□□□□ -1.08
HDAC6-207ENST00000430858 SRD5A1P18405 259 aa8.29□□□□□ -1.08
HDAC6-207ENST00000430858 HSD11B1P28845 292 aa8.29□□□□□ -1.08
HDAC6-207ENST00000430858 ZNF92Q03936 586 aa8.29□□□□□ -1.08
HDAC6-207ENST00000430858 PTGES3Q15185 160 aaKnown RBP8.29□□□□□ -1.08
HDAC6-207ENST00000430858 KDM4DQ6B0I6 523 aa8.29□□□□□ -1.08
HDAC6-207ENST00000430858 CCDC121Q6ZUS5 278 aa8.29□□□□□ -1.08
HDAC6-207ENST00000430858 CXXC5Q7LFL8 322 aaKnown RBP8.29□□□□□ -1.08
HDAC6-207ENST00000430858 AMIGO2Q86SJ2 522 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms