RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CD300LFQ8TDQ1 290 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 SMIM4Q8WVI0 70 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 CNTNAP3BQ96NU0 1288 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 HRH3Q9Y5N1 445 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 SLC22A20A6NK97 555 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 PRR18Q8N4B5 295 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 SPSB1Q96BD6 273 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 FAM212BQ9NTI7 297 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-208ENST00000430669 NKX6-3A6NJ46 265 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 SEMG1P04279 462 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 CLEC2LP0C7M8 214 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 FUT6P51993 359 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 LSRQ86X29 649 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-208ENST00000430669 ALPK3Q96L96 1907 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF816-ZNF321PA0A0X1KG74 233 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 TRIM64CA6NLI5 447 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 PRRG2O14669 202 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 TSPAN15O95858 294 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 IGHA1P01876 353 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 EIF4EP06730 217 aaKnown RBP10.39□□□□□ -0.75
PTCH1-208ENST00000430669 OR4C3Q8NH37 302 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 IL1F10Q8WWZ1 152 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 TGIF2Q9GZN2 237 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 GLRX2Q9NS18 164 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 B8ZZF3 427 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 SLC17A2O00624 439 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 HCCSP53701 268 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 YBX1P67809 324 aaKnown RBP10.39□□□□□ -0.75
PTCH1-208ENST00000430669 PSG6Q00889 435 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 SPNS2Q8IVW8 549 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 ASB10Q8WXI3 467 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 RNF167Q9H6Y7 350 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 A0A1W2PNR3 127 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 B4E171 279 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 PMP2P02689 132 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 C1QBP02746 253 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 TSPAN7P41732 249 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 PAN3Q58A45 887 aaKnown RBP10.39□□□□□ -0.75
PTCH1-208ENST00000430669 PWWP2BQ6NUJ5 590 aa10.39□□□□□ -0.75
PTCH1-208ENST00000430669 ATG4DQ86TL0 474 aaPredicted RBP10.39□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF806P0C7X5 589 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 IL9P15248 144 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 C2orf76Q3KRA6 126 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 EXD3Q8N9H8 876 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 OR51E1Q8TCB6 317 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 GLYATL2Q8WU03 294 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 APOBEC3DQ96AK3 386 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-208ENST00000430669 UBL7Q96S82 380 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-208ENST00000430669 MENTQ9BUN1 341 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SRRQ9GZT4 340 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 FAM166BA8MTA8 275 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 NRG2O14511 850 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SH2D1BO14796 132 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SPINT2O43291 252 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 RAG2P55895 527 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SKP2Q13309 424 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 FJX1Q86VR8 437 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 Q8IYB0 196 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 ZDHHC23Q8IYP9 409 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 C11orf40Q8WZ69 217 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 C12orf49Q9H741 205 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 MBD1Q9UIS9 605 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-208ENST00000430669 ARGFXA6NJG6 315 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 IGLV3-19P01714 112 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SNRPD2P62316 118 aaKnown RBP10.38□□□□□ -0.75
PTCH1-208ENST00000430669 RAB35Q15286 201 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 DYNLRB1Q9NP97 96 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 PILRAQ9UKJ1 303 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 IL3RAP26951 378 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 PEA15Q15121 130 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 FAM185AQ8N0U4 392 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SDK2Q58EX2 2172 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 AHCTF1Q8WYP5 2266 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 C5orf49A4QMS7 147 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 OR1C1Q15619 314 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SLC52A3Q9NQ40 469 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 PROCRQ9UNN8 238 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 TP53TG5Q9Y2B4 290 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 CORO6Q6QEF8 472 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 ZNF610Q8N9Z0 462 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 OR52I2Q8NH67 350 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 OR1F12Q8NHA8 337 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 C10orf90Q96M02 699 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 KMT2EQ8IZD2 1858 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 EML2O95834 649 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 EFEMP2O95967 443 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 CSF3P09919 207 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SOX18P35713 384 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 PPP1CAP62136 330 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SOWAHCQ53LP3 525 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SLC38A9Q8NBW4 561 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 GPR119Q8TDV5 335 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 TMEM165Q9HC07 324 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 SLC22A13Q9Y226 551 aa10.38□□□□□ -0.75
PTCH1-208ENST00000430669 OR6C68A6NDL8 312 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 SERPINA7P05543 415 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 BCL2A1Q16548 175 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 CELF2-AS1Q8N7Q2 184 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 ADPRHL1Q8NDY3 354 aa10.37□□□□□ -0.75
PTCH1-208ENST00000430669 DNASE2BQ8WZ79 361 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms