RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CORO6Q6QEF8 472 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 CFAP77Q6ZQR2 320 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.44□□□□□ -0.42
MSH5-208ENST00000429846 ZBTB46Q86UZ6 589 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 OR11L1Q8NGX0 322 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 OR2AJ1Q8NGZ0 328 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 OR52J3Q8NH60 311 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 NMNAT3Q96T66 252 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 PITX2Q99697 317 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 NUDT16L1Q9BRJ7 211 aaKnown RBP12.44□□□□□ -0.42
MSH5-208ENST00000429846 CDADC1Q9BWV3 514 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 SLC22A4Q9H015 551 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 SLITRK2Q9H156 845 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 GORASP2Q9H8Y8 452 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 KCNG2Q9UJ96 466 aa12.44□□□□□ -0.42
MSH5-208ENST00000429846 F5H5K5 113 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 IDH3BO43837 385 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 DIRAS1O95057 198 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 GADD45GO95257 159 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 HLA-DPB1P04440 258 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 HIST1H1CP16403 213 aaKnown RBP12.43□□□□□ -0.42
MSH5-208ENST00000429846 IFNGR2P38484 337 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 NPY4RP50391 375 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 RAD23AP54725 363 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 TRAP1Q12931 704 aaKnown RBP12.43□□□□□ -0.42
MSH5-208ENST00000429846 MAB21L1Q13394 359 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 KCNJ8Q15842 424 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 HSP90B2PQ58FF3 399 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 PGAP1Q75T13 922 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 FAM86B1Q8N7N1 296 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 IFT27Q9BW83 186 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 PRDM13Q9H4Q3 707 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 WDR76Q9H967 626 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 SRA1Q9HD15 236 aaKnown RBP12.43□□□□□ -0.42
MSH5-208ENST00000429846 RPRD1BQ9NQG5 326 aaKnown RBP12.43□□□□□ -0.42
MSH5-208ENST00000429846 CYB5R1Q9UHQ9 305 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 PKD1L1Q8TDX9 2849 aa12.43□□□□□ -0.42
MSH5-208ENST00000429846 IGHV3-64DA0A0J9YX35 117 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 ENSAO43768 121 aaKnown RBP12.42□□□□□ -0.42
MSH5-208ENST00000429846 HLA-DQA2P01906 255 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 LCATP04180 440 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 SEMG1P04279 462 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 PRDX6P30041 224 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 PSMB10P40306 273 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 TPTEP56180 551 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 SPIBQ01892 262 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 GPR157Q5UAW9 335 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 WDR25Q64LD2 544 aaPredicted RBP12.42□□□□□ -0.42
MSH5-208ENST00000429846 C16orf87Q6PH81 154 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 MRPL21Q7Z2W9 205 aaKnown RBP12.42□□□□□ -0.42
MSH5-208ENST00000429846 LINC00346Q8IVM7 164 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 FITM2Q8N6M3 262 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 OR4K13Q8NH42 304 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 PNRC2Q9NPJ4 139 aaKnown RBP12.42□□□□□ -0.42
MSH5-208ENST00000429846 TRIM36Q9NQ86 728 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 ADA2Q9NZK5 511 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 KIF17Q9P2E2 1029 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 MAGEL2Q9UJ55 1249 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 MMP24Q9Y5R2 645 aa12.42□□□□□ -0.42
MSH5-208ENST00000429846 IGHV3OR16-10A0A075B7F0 116 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 A0A1B0GUS0 222 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 M0R135 149 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 OR10H3O60404 316 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 FAM20BO75063 409 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 GGT2P36268 569 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 PMELP40967 661 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 CLEC12AQ5QGZ9 265 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 FAM201AQ5SY85 155 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 ZNF362Q5T0B9 420 aaPredicted RBP12.41□□□□□ -0.42
MSH5-208ENST00000429846 ZNF841Q6ZN19 808 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 ZNF620Q6ZNG0 422 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 PLPP7Q8NBV4 271 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 OR10S1Q8NGN2 331 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 SPRYD4Q8WW59 207 aaPredicted RBP12.41□□□□□ -0.42
MSH5-208ENST00000429846 SPTSSAQ969W0 71 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 MCUR1Q96AQ8 359 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 SLCO4A1Q96BD0 722 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 ZNF799Q96GE5 643 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 PYURFQ96I23 114 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 NSRP1Q9H0G5 558 aaKnown RBP12.41□□□□□ -0.42
MSH5-208ENST00000429846 MYLK2Q9H1R3 596 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 FN3KRPQ9HA64 309 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 NOX4Q9NPH5 578 aa12.41□□□□□ -0.42
MSH5-208ENST00000429846 OR6C68A6NDL8 312 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 SRRM5B3KS81 715 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 GMDSO60547 372 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 PTBP3O95758 552 aaKnown RBP12.4□□□□□ -0.42
MSH5-208ENST00000429846 FABP3P05413 133 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 LIPFP07098 398 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 GSSP48637 474 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 FGF12P61328 243 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 OR8G1Q15617 311 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 CD276Q5ZPR3 534 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 RPL13AP3Q6NVV1 102 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 TREML4Q6UXN2 200 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 SPATC1Q76KD6 591 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 SDR9C7Q8NEX9 313 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 OR52L1Q8NGH7 329 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 OR4C15Q8NGM1 316 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms