RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 GPX8Q8TED1 209 aa13.37□□□□□ -0.27
CACTIN-203ENST00000429344 NUDT9Q9BW91 350 aa13.37□□□□□ -0.27
CACTIN-203ENST00000429344 SEC61A2Q9H9S3 476 aa13.37□□□□□ -0.27
CACTIN-203ENST00000429344 CHMP1AQ9HD42 196 aaPredicted RBP13.37□□□□□ -0.27
CACTIN-203ENST00000429344 ZNF275Q9NSD4 429 aaPredicted RBP13.37□□□□□ -0.27
CACTIN-203ENST00000429344 HIF3AQ9Y2N7 669 aa13.37□□□□□ -0.27
CACTIN-203ENST00000429344 LOC101059948A0A1B0GTJ6 334 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 LOC107986453A0A1B0GWG9 222 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 GP1BAP07359 652 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 ACOT7LQ6ZUV0 252 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 GPER1Q99527 375 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 SCRG1O75711 98 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 PDGFBP01127 241 aaPredicted RBP13.36□□□□□ -0.27
CACTIN-203ENST00000429344 CD96P40200 585 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 ELAVL1Q15717 326 aaKnown RBP13.36□□□□□ -0.27
CACTIN-203ENST00000429344 FAM122BQ7Z309 247 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 LDLRAD3Q86YD5 345 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 NAXEQ8NCW5 288 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 OR5D18Q8NGL1 313 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 NANPQ8TBE9 248 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 STT3BQ8TCJ2 826 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 CYYR1Q96J86 154 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 SLC25A21Q9BQT8 299 aaPredicted RBP13.36□□□□□ -0.27
CACTIN-203ENST00000429344 CRB3Q9BUF7 120 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 EMC6Q9BV81 110 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 KLRF1Q9NZS2 232 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 LRP12Q9Y561 859 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 SULT1C2O00338 296 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 ADAP1O75689 374 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 HOXB5P09067 269 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 FLI1Q01543 452 aaPredicted RBP13.36□□□□□ -0.27
CACTIN-203ENST00000429344 ZNF684Q5T5D7 378 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 DCXRQ7Z4W1 244 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 ZNF679Q8IYX0 411 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 OR4D6Q8NGJ1 314 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 FBXO17Q96EF6 278 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 OR8B4Q96RC9 309 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 LMF2Q9BU23 707 aaKnown RBP13.36□□□□□ -0.27
CACTIN-203ENST00000429344 ACKR4Q9NPB9 350 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 VDAC3Q9Y277 283 aa13.36□□□□□ -0.27
CACTIN-203ENST00000429344 BLACEA4D250 179 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 SIGLEC6O43699 453 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 MPIG6BO95866 241 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 WDPCPO95876 746 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 SERPINA5P05154 406 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 NME2P22392 152 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 ARFRP1Q13795 201 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 ZNF141Q15928 474 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 LINC00114Q6XXX2 140 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 ADGRE4PQ86SQ3 457 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 ATG4DQ86TL0 474 aaPredicted RBP13.35□□□□□ -0.27
CACTIN-203ENST00000429344 RTN4RQ9BZR6 473 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 BANF2Q9H503 90 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 HHLA2Q9UM44 414 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 MMACHCQ9Y4U1 282 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 PPICP45877 212 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 FAM209BQ5JX69 171 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 ZNF440Q8IYI8 595 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 KCNRGQ8N5I3 272 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 ZNF615Q8N8J6 731 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 OR4K17Q8NGC6 315 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 OR10Z1Q8NGY1 313 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 PTPMT1Q8WUK0 201 aaPredicted RBP13.35□□□□□ -0.27
CACTIN-203ENST00000429344 ASB5Q8WWX0 329 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 C8orf44Q96CB5 159 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 VN1R1Q9GZP7 353 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 TLNRD1Q9H1K6 362 aa13.35□□□□□ -0.27
CACTIN-203ENST00000429344 ZNF629Q9UEG4 869 aaPredicted RBP13.35□□□□□ -0.27
CACTIN-203ENST00000429344 H3BML4 177 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 KNG1P01042 644 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 ITGB2P05107 769 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 HLA-DOBP13765 273 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 STARD6P59095 220 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 PDZK1IP1Q13113 114 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 AWAT2Q6E213 333 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 LCN10Q6JVE6 187 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 ZNF248Q8NDW4 579 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 OR13C8Q8NGS7 320 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 MFRPQ9BY79 579 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 SLC22A11Q9NSA0 550 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 SUSD2Q9UGT4 822 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 TNFSF18Q9UNG2 199 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 NBASA2RRP1 2371 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 DENND4AQ7Z401 1863 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 TMEM218A2RU14 115 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 SDCBPO00560 298 aaPredicted RBP13.34□□□□□ -0.27
CACTIN-203ENST00000429344 H2BFMP0C1H6 154 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 ACY1Q03154 408 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 IKZF1Q13422 519 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 EEF1A1P5Q5VTE0 462 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 FAM69BQ5VUD6 431 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 NUBPLQ8TB37 319 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 EDAQ92838 391 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 LRFN5Q96NI6 719 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 CNTNAP3BQ96NU0 1288 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 ZNF587Q96SQ5 575 aaPredicted RBP13.34□□□□□ -0.27
CACTIN-203ENST00000429344 PIGMQ9H3S5 423 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 MED29Q9NX70 200 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 TRBV5-7A0A0A0MS05 114 aa13.34□□□□□ -0.27
CACTIN-203ENST00000429344 A0A1W2PPC1 479 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms