RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ADAM20O43506 726 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 SDHAP31040 664 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 CD200P41217 278 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 MEP1BQ16820 701 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 GPR139Q6DWJ6 353 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 SFRP4Q6FHJ7 346 aaPredicted RBP15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 CORO6Q6QEF8 472 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 TMPRSS11FQ6ZWK6 438 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 RRM2BQ7LG56 351 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 OR2T12Q8NG77 320 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 VSX1Q9NZR4 365 aaPredicted RBP15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 RNF7Q9UBF6 113 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 LHFPL6Q9Y693 200 aa15.16■□□□□ 0.02
UPK3BP1-201ENST00000428678 C3orf80F5H4A9 247 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 LGALS8O00214 317 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 NDUFB2O95178 105 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 IER3P46695 156 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 RAD23AP54725 363 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 GK2Q14410 553 aaPredicted RBP15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 OR8G1Q15617 311 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 OR8B8Q15620 311 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 KCNMB1Q16558 191 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 C2orf68Q2NKX9 166 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 PDZD9Q8IXQ8 264 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 FN3KRPQ9HA64 309 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 SMURF1Q9HCE7 757 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 INTS9Q9NV88 658 aaKnown RBP15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 TMEM5Q9Y2B1 443 aa15.15■□□□□ 0.02
UPK3BP1-201ENST00000428678 ZNF682O95780 498 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 NPPAP01160 153 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 ARF6P62330 175 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 HIST1H3AP68431 136 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 MALLQ13021 153 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 HIST2H3PS2Q5TEC6 136 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 METTL21CQ5VZV1 264 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 PGM2L1Q6PCE3 622 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 GDPGP1Q6ZNW5 385 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 COLCA1Q6ZS62 124 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 PTCHD4Q6ZW05 846 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 HIST2H3AQ71DI3 136 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 ADCK1Q86TW2 530 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 LDLRAD3Q86YD5 345 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 SPRYD4Q8WW59 207 aaPredicted RBP15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 SLCO4A1Q96BD0 722 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 FAM46AQ96IP4 442 aaKnown RBP15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 ATP6V1G3Q96LB4 118 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 TSSK2Q96PF2 358 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 SIRPDQ9H106 197 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 RASSF4Q9H2L5 321 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 NRIP3Q9NQ35 241 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 ZNF281Q9Y2X9 895 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 IER3IP1Q9Y5U9 82 aa15.14■□□□□ 0.01
UPK3BP1-201ENST00000428678 F5H5K5 113 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 LCATP04180 440 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 ACSM4P0C7M7 580 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 CA6P23280 308 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 COX10Q12887 443 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 RSPO1Q2MKA7 263 aaPredicted RBP15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 COQ5Q5HYK3 327 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 DHRS7BQ6IAN0 325 aaPredicted RBP15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 TET2Q6N021 2002 aaPredicted RBP15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 DNM1P34Q6PK57 102 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 Q6ZSV7 163 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 PGAP1Q75T13 922 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 ZSCAN4Q8NAM6 433 aaPredicted RBP15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 LRTOMTQ8WZ04 291 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 PITX2Q99697 317 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 DPAGT1Q9H3H5 408 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 TRIM36Q9NQ86 728 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 GID8Q9NWU2 228 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 NOTCH3Q9UM47 2321 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 FAM96BQ9Y3D0 163 aa15.13■□□□□ 0.01
UPK3BP1-201ENST00000428678 TRAV38-1A0A0B4J264 116 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 BBIP1A8MTZ0 92 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 DCTN6O00399 190 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 GYPAP02724 150 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 CRABP1P29762 137 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 CDKN2AP42771 156 aaKnown RBP15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 IFI44LQ53G44 452 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 FBLN7Q53RD9 439 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 HIST2H2BDQ6DRA6 164 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 CFAP77Q6ZQR2 320 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 MRPL21Q7Z2W9 205 aaKnown RBP15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 LINC00346Q8IVM7 164 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 GPX7Q96SL4 187 aaPredicted RBP15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 SIKE1Q9BRV8 207 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 ADAT1Q9BUB4 502 aaKnown RBP15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 SIGLEC7Q9Y286 467 aa15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 NOP16Q9Y3C1 178 aaKnown RBP15.12■□□□□ 0.01
UPK3BP1-201ENST00000428678 OOEPA6NGQ2 149 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 NDUFA2O43678 99 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 OR10H3O60404 316 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 EDF1O60869 148 aaKnown RBP15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 PTP4A3O75365 173 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 CSF1P09603 554 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 TRAP1Q12931 704 aaKnown RBP15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 KRTAP27-1Q3LI81 207 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 FKBP9P1Q75LS8 142 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 BTN2A1Q7KYR7 527 aa15.11■□□□□ 0.01
UPK3BP1-201ENST00000428678 NAA40Q86UY6 237 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms