RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 NANOS3P60323 173 aaKnown RBP6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 BDH1Q02338 343 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 BSPH1Q075Z2 132 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 SPOCK1Q08629 439 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 SNTB2Q13425 540 aaKnown RBP6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 ALKBH1Q13686 389 aaKnown RBP6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 CDK5R1Q15078 307 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 SNAI3Q3KNW1 292 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 KRTAP27-1Q3LI81 207 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 CCDC58Q4VC31 144 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 SPATA46Q5T0L3 261 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 LIPKQ5VXJ0 399 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 FDX2Q6P4F2 183 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 MEX3BQ6ZN04 569 aaKnown RBP6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 GPR141Q7Z602 305 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 NAA40Q86UY6 237 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 CATSPERDQ86XM0 798 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 EGFL6Q8IUX8 553 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF101Q8IZC7 436 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 PRSS35Q8N3Z0 413 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 IL17RDQ8NFM7 739 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR8B12Q8NGG6 310 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR52H1Q8NGJ2 320 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR5AK2Q8NH90 309 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 APOBEC3DQ96AK3 386 aaPredicted RBP6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 SMIM19Q96E16 107 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 RADILQ96JH8 1075 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF75AQ96N20 296 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 DACH2Q96NX9 599 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 PDCD1LG2Q9BQ51 273 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 TMED9Q9BVK6 235 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 PBOV1Q9GZY1 135 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 COMMD4Q9H0A8 199 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 ESRP2Q9H6T0 727 aaKnown RBP6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 SLC24A3Q9HC58 644 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 ISYNA1Q9NPH2 558 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 PTTG3PQ9NZH4 202 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 CRIM1Q9NZV1 1036 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 FRRS1LQ9P0K9 344 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 NUFIP1Q9UHK0 495 aaKnown RBP6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 ST6GALNAC2Q9UJ37 374 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 POU2F3Q9UKI9 436 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 SLC22A13Q9Y226 551 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 SIRT4Q9Y6E7 314 aaPredicted RBP6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 DOPEY1Q5JWR5 2465 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 INTS1Q8N201 2190 aaKnown RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 A0A1B0GVI7 797 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 LOC107986453A0A1B0GWG9 222 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 C5orf63A6NC05 138 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 WIPF3A6NGB9 483 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 ACOD1A6NK06 481 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 TMEM212A6NML5 194 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR4C45A6NMZ5 311 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 P2RY10O00398 339 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 CCRL2O00421 344 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 ABCD4O14678 606 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 GPRIN2O60269 458 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 SMPD2O60906 423 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZFPL1O95159 310 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 CD3EP07766 207 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 UBCP0CG48 685 aaKnown RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 CPEP16870 476 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 JUNBP17275 347 aaPredicted RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 CALCRP30988 508 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 WNT5AP41221 380 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 RPL5P46777 297 aaKnown RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 CCR9P51686 369 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 PPP1CBP62140 327 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 SRSF1Q07955 248 aaKnown RBP eCLIP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 ACSM1Q08AH1 577 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 MALLQ13021 153 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 SSX1Q16384 188 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 RSPO1Q2MKA7 263 aaPredicted RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 BEX5Q5H9J7 111 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 GLYATL3Q5SZD4 288 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 SYT6Q5T7P8 510 aaPredicted RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 DMKNQ6E0U4 476 aaPredicted RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 ADAM5Q6NVV9 412 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 SLC22A25Q6T423 547 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 UNQ6126/PRO20091Q6UXV3 157 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF704Q6ZNC4 412 aaPredicted RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 PRSS45Q7RTY3 260 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 MRPL21Q7Z2W9 205 aaKnown RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 ELMOD2Q8IZ81 293 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR2AE1Q8NHA4 323 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 FAM222BQ8WU58 562 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 TSEN15Q8WW01 171 aaKnown RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 AKAP1Q92667 903 aaKnown RBP eCLIP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 GHSRQ92847 366 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 TMEM203Q969S6 136 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 PPP1R14AQ96A00 147 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 RNF166Q96A37 237 aaPredicted RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 PLPPR2Q96GM1 343 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 FAM71F1Q96KD3 344 aaPredicted RBP6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 C1QTNF5Q9BXJ0 243 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 G6PC2Q9NQR9 355 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 GPR84Q9NQS5 396 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 NDUFB11Q9NX14 153 aa6.84□□□□□ -1.31
HMGA1P4-201ENST00000428643 SPEF1Q9Y4P9 236 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms