RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 HSP90B2PQ58FF3 399 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 CLEC12AQ5QGZ9 265 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 ZNF362Q5T0B9 420 aaPredicted RBP12.96□□□□□ -0.33
SEC13-210ENST00000428626 SLC35F1Q5T1Q4 408 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 PRAMEF6Q5VXH4 476 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 PGBD2Q6P3X8 592 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 PGM2L1Q6PCE3 622 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 ZNF620Q6ZNG0 422 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 PITX2Q99697 317 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 ATF6BQ99941 703 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 MRI1Q9BV20 369 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 FAM107BQ9H098 131 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 EGLN3Q9H6Z9 239 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 KRCC1Q9NPI7 259 aaPredicted RBP12.96□□□□□ -0.33
SEC13-210ENST00000428626 MED4Q9NPJ6 270 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 OR5V1Q9UGF6 321 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 MDFIC2A0A1B0GVS7 189 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 SNX3O60493 162 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 PLATP00750 562 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 RENP00797 406 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 PYCR1P32322 319 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 GATA4P43694 442 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 RAD23AP54725 363 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 ZNF841Q6ZN19 808 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 PARP8Q8N3A8 854 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 CYB561A3Q8NBI2 242 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 OR52E2Q8NGJ4 325 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 SGMS2Q8NHU3 365 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 RAB40AQ8WXH6 277 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 SLCO4A1Q96BD0 722 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 UPRTQ96BW1 309 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 ZMYND19Q96E35 227 aaPredicted RBP12.95□□□□□ -0.34
SEC13-210ENST00000428626 ZNF747Q9BV97 191 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 CDADC1Q9BWV3 514 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 TMEM100Q9NV29 134 aa12.95□□□□□ -0.34
SEC13-210ENST00000428626 TVP23AA6NH52 213 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 BHLHE40O14503 412 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 TMPRSS2O15393 492 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 FAM20BO75063 409 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 FSTL3O95633 263 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 LCATP04180 440 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 SMIM11AP58511 58 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 GNB2P62879 340 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEC13-210ENST00000428626 BAMBIQ13145 260 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 SLC9A3R2Q15599 337 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 SNAI3Q3KNW1 292 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 RBMS3Q6XE24 437 aaKnown RBP12.94□□□□□ -0.34
SEC13-210ENST00000428626 OR9Q2Q8NGE9 314 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 OR8D4Q8NGM9 314 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 Q8TCH9 128 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 NEIL1Q96FI4 390 aaPredicted RBP12.94□□□□□ -0.34
SEC13-210ENST00000428626 CDRT15Q96T59 188 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 BTBD10Q9BSF8 475 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 HCAR1Q9BXC0 346 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 IL1RAPQ9NPH3 570 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 UFSP2Q9NUQ7 469 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 ARL8BQ9NVJ2 186 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 MIOXQ9UGB7 285 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 MAGEL2Q9UJ55 1249 aa12.94□□□□□ -0.34
SEC13-210ENST00000428626 TRAV40A0A0B4J280 105 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 KIR2DS1A0A191URI9 304 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 C22orf46C9J442 243 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 FCN3O75636 299 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 FABP3P05413 133 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 RNASE1P07998 156 aaKnown RBP12.93□□□□□ -0.34
SEC13-210ENST00000428626 PPIAL4GP0DN37 164 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 NOS3P29474 1203 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 CD200P41217 278 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 PITPNBP48739 271 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 ZNF92Q03936 586 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 TSPAN31Q12999 210 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 SLC36A3Q495N2 470 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 C9orf139Q6ZV77 190 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 PGAM4Q8N0Y7 254 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 FITM2Q8N6M3 262 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 OR51L1Q8NGJ5 315 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 OR2AE1Q8NHA4 323 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 GNPDA2Q8TDQ7 276 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 NSMCE2Q96MF7 247 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 MS4A7Q9GZW8 240 aaPredicted RBP12.93□□□□□ -0.34
SEC13-210ENST00000428626 CTSZQ9UBR2 303 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 TMCC3Q9ULS5 477 aa12.93□□□□□ -0.34
SEC13-210ENST00000428626 M0R135 149 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 IDH3BO43837 385 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 GMNNO75496 209 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 HLA-DQA2P01906 255 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 CA6P23280 308 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 OTX1P32242 354 aaPredicted RBP12.92□□□□□ -0.34
SEC13-210ENST00000428626 PSMB10P40306 273 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 FOXL1Q12952 345 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 PPP1R8Q12972 351 aaKnown RBP12.92□□□□□ -0.34
SEC13-210ENST00000428626 ECH1Q13011 328 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 WDR25Q64LD2 544 aaPredicted RBP12.92□□□□□ -0.34
SEC13-210ENST00000428626 ZNF770Q6IQ21 691 aaPredicted RBP12.92□□□□□ -0.34
SEC13-210ENST00000428626 LRRN1Q6UXK5 716 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 BRD3OSQ6XYD6 125 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 PGAP1Q75T13 922 aa12.92□□□□□ -0.34
SEC13-210ENST00000428626 ZDHHC21Q8IVQ6 265 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms