RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 RCBTB1Q8NDN9 531 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 OR51L1Q8NGJ5 315 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 AKR7LQ8NHP1 331 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 FAM174AQ8TBP5 190 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 FBXO17Q96EF6 278 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 GFOD1Q9NXC2 390 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 FLRT3Q9NZU0 649 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ASF1AQ9Y294 204 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 A0A1W2PS29 197 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 TSPAN2O60636 221 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 CHRM2P08172 466 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 PRKAR2AP13861 404 aaKnown RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 FOSL2P15408 326 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 PRPS1P60891 318 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 DLK2Q6UY11 383 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 BOLLQ8N9W6 283 aaKnown RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 OR9K2Q8NGE7 335 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 C1orf147Q96MC9 270 aaPredicted RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 WDR92Q96MX6 357 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SYNPO2LQ9H987 977 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 UBQLN4Q9NRR5 601 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 PISDQ9UG56 409 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SLC23A2Q9UGH3 650 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SMG1Q96Q15 3661 aaKnown RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 RAI1Q7Z5J4 1906 aaPredicted RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 H7C4K7 107 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 COX5BP10606 129 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 CDKN2AP42771 156 aaKnown RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 Q6ZVU0 165 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 SOCS4Q8WXH5 440 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SLC25A18Q9H1K4 315 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SLC27A6Q9Y2P4 619 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 TEX15Q9BXT5 2789 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 WIPF3A6NGB9 483 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 NDUFS4O43181 175 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 HCKP08631 526 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 OR5H8P0DN80 308 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 ST6GAL1P15907 406 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 SEC13P55735 322 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 SKP2Q13309 424 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 RAB35Q15286 201 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 ELOBQ15370 118 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 SURF2Q15527 256 aaPredicted RBP4.59□□□□□ -1.67
RIF1-203ENST00000428287 GPR157Q5UAW9 335 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 KDM8Q8N371 416 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 FAM71E2Q8N5Q1 922 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 SPSB2Q99619 263 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 KCNJ16Q9NPI9 418 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 GNG8Q9UK08 70 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 MRPS33Q9Y291 106 aaKnown RBP4.59□□□□□ -1.67
RIF1-203ENST00000428287 hCG_1809904A0A1W2PP81 198 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 A0A1W2PR64 198 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 A0A1W2PRV1 198 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 C9J4A7 227 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 GPANK1O95872 356 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 GATMP50440 423 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 GUK1Q16774 197 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 ERN2Q76MJ5 926 aaKnown RBP4.59□□□□□ -1.67
RIF1-203ENST00000428287 ZNF619Q8N2I2 560 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 LRTM2Q8N967 370 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 POC1AQ8NBT0 407 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 OR6K6Q8NGW6 343 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 OR8B4Q96RC9 309 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 PITPNC1Q9UKF7 332 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 TRAV1-1A0A0B4J248 108 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 TMEM235A6NFC5 223 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 GLOD5A6NK44 160 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 K7EQS6 105 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 TGOLN2O43493 480 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 NPIPB7O75200 414 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 OR8G3PP0DMU2 310 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 RAB4AP20338 218 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 SLC16A1P53985 500 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 SLC10A1Q14973 349 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 GLYATL3Q5SZD4 288 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 PRAMEF17Q5VTA0 474 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 SPNS3Q6ZMD2 512 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 HIST2H3AQ71DI3 136 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 NRROSQ86YC3 692 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 PTCHD1Q96NR3 888 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 LMAN2LQ9H0V9 348 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 TMEM231Q9H6L2 316 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 C4orf51C9J302 202 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 ZNF587BE7ETH6 402 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 PPP1R2P9O14990 202 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 ZNF354AO60765 605 aaPredicted RBP4.59□□□□□ -1.67
RIF1-203ENST00000428287 ALOX12BO75342 701 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 THPOP40225 353 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 NUBP1P53384 320 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 PMPCAQ10713 525 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 LRRC37A5PQ49AS3 106 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 CATSPERDQ86XM0 798 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 PDE7BQ9NP56 450 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 MUC4Q99102 2169 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 ELOA3CA0A087WX78 387 aaPredicted RBP4.59□□□□□ -1.67
RIF1-203ENST00000428287 FAM221BA6H8Z2 402 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 K7N7A8 449 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 SYT7O43581 403 aa4.59□□□□□ -1.67
RIF1-203ENST00000428287 ERAL1O75616 437 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms