RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 DGCR2P98153 550 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 RBM39Q14498 530 aaKnown RBP9.57□□□□□ -0.88
TCOF1-204ENST00000427724 PAN3Q58A45 887 aaKnown RBP9.57□□□□□ -0.88
TCOF1-204ENST00000427724 CTRB2Q6GPI1 263 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF610Q8N9Z0 462 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 CD300LFQ8TDQ1 290 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 HSD17B8Q92506 261 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 RASD2Q96D21 266 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 ATF6BQ99941 703 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 SLC25A19Q9HC21 320 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 SIRT3Q9NTG7 399 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-204ENST00000427724 ABRACLQ9P1F3 81 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 SLC5A6Q9Y289 635 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 V9GY05 133 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 OR2M5A3KFT3 312 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 PYCARD-AS1I3L0S3 204 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF593O00488 134 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-204ENST00000427724 CDC14BO60729 498 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 UBL3O95164 117 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 PPP3CBP16298 524 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 NDUFB7P17568 137 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 PEBP1P30086 187 aaKnown RBP9.57□□□□□ -0.88
TCOF1-204ENST00000427724 FAM189A2Q15884 450 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF546Q86UE3 836 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 SULF2Q8IWU5 870 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF808Q8N4W9 903 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF321PQ8N8H1 164 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 OR8D4Q8NGM9 314 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 NANPQ8TBE9 248 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 PAQR8Q8TEZ7 354 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 ORAI1Q96D31 301 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 URM1Q9BTM9 101 aaKnown RBP9.57□□□□□ -0.88
TCOF1-204ENST00000427724 INPP5EQ9NRR6 644 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 PLEKHB1Q9UF11 243 aaPredicted RBP9.57□□□□□ -0.88
TCOF1-204ENST00000427724 HDGFL3Q9Y3E1 203 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 NAV3Q8IVL0 2385 aa9.57□□□□□ -0.88
TCOF1-204ENST00000427724 PHYHO14832 338 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 TO15178 435 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 CD3EP07766 207 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 DIO1P49895 249 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 EDDM3BP56851 147 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 BDH1Q02338 343 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 SVBPQ8N300 66 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 BOD1Q96IK1 185 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 ALG12Q9BV10 488 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 C20orf85Q9H1P6 137 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 ANKRD19PQ9H560 264 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 NOX4Q9NPH5 578 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 ZNF175Q9Y473 711 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 RALGAPA1Q6GYQ0 2036 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 C5orf49A4QMS7 147 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 TRIM64BA6NI03 449 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 ATP1B1P05026 303 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 CDK5Q00535 292 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 C1QL3Q5VWW1 255 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 OTPQ5XKR4 325 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 C9orf62Q8N4C0 152 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 CPEB3Q8NE35 698 aaKnown RBP9.56□□□□□ -0.88
TCOF1-204ENST00000427724 OR2M7Q8NG81 312 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 NUBPLQ8TB37 319 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 GPR148Q8TDV2 347 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 ZDHHC16Q969W1 377 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 WDFY2Q96P53 400 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 A0A1W2PPV9 198 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 ANKRD61A6NGH8 418 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 HRKO00198 91 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 SHOXO15266 292 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 ATG12O94817 140 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 EFEMP2O95967 443 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 SEMG1P04279 462 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 AGTR1P30556 359 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 CFHR1Q03591 330 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 CDCP2Q5VXM1 449 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 TMEM108Q6UXF1 575 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 NKX6-2Q9C056 277 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-204ENST00000427724 MIXL1Q9H2W2 232 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 EVA1AQ9H8M9 152 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 LIN7BQ9HAP6 207 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 GSKIPQ9P0R6 139 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 SCN2AQ99250 2005 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 VCANP13611 3396 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 CDX4O14627 284 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-204ENST00000427724 MT-ATP6P00846 226 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 ADRB1P08588 477 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 EMDP50402 254 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 S100A10P60903 97 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 UBE2MP61081 183 aaKnown RBP9.56□□□□□ -0.88
TCOF1-204ENST00000427724 HERV-K104P61576 105 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 C9orf152Q5JTZ5 239 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 PXT1Q8NFP0 134 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 SCARB1Q8WTV0 552 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 TMEM171Q8WVE6 324 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 WDR34Q96EX3 536 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 SLC6A7Q99884 636 aa9.56□□□□□ -0.88
TCOF1-204ENST00000427724 COA3Q9Y2R0 106 aaPredicted RBP9.56□□□□□ -0.88
TCOF1-204ENST00000427724 TCRBV16S1A1N1A0A5B0 115 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 SNAPC5O75971 98 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 CTSBP07858 339 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 ANKRD34CP0C6C1 535 aa9.55□□□□□ -0.88
TCOF1-204ENST00000427724 ANXA7P20073 488 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms