RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 SELENOPP49908 381 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 SNTB1Q13884 538 aaKnown RBP13.7□□□□□ -0.22
SHOX2-202ENST00000425436 ZNF79Q15937 498 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 FAM27D1Q5T7N8 215 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 CNIH2Q6PI25 160 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 TFAP2EQ6VUC0 442 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 SNX29P2Q8IUI4 249 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 CYSLTR2Q9NS75 346 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 DOPEY2Q9Y3R5 2298 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 A0A0G2JK05 382 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 SMIM30A4D0T7 59 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 C19orf84I3L1E1 186 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 MSTNO14793 375 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 GPANK1O95872 356 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 OR3A2P47893 321 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 TFF3Q07654 80 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 KCNMB1Q16558 191 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 HIST3H3Q16695 136 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 SLC25A47Q6Q0C1 308 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 BAIAP2L2Q6UXY1 529 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.69□□□□□ -0.22
SHOX2-202ENST00000425436 UBE2J2Q8N2K1 259 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 OR13C5Q8NGS8 318 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 APH1AQ96BI3 265 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 RBM24Q9BX46 236 aaKnown RBP13.69□□□□□ -0.22
SHOX2-202ENST00000425436 PPP1R3EQ9H7J1 279 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 NIPAL2Q9H841 368 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 PARPBPQ9NWS1 579 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 R4GMQ9 66 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 ICE1Q9Y2F5 2266 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 IL7P13232 177 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 THBS2P35442 1172 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 ASCL1P50553 236 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 BCAP31P51572 246 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 FAM27E3Q08E93 113 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 CEP78Q5JTW2 689 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 CARD17Q5XLA6 110 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 LRRN1Q6UXK5 716 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 ZNF704Q6ZNC4 412 aaPredicted RBP13.69□□□□□ -0.22
SHOX2-202ENST00000425436 DCXRQ7Z4W1 244 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 NR2C2APQ86WQ0 139 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 RNF133Q8WVZ7 376 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 C11orf40Q8WZ69 217 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 TMEM45BQ96B21 275 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 MS4A3Q96HJ5 214 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 C1orf198Q9H425 327 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 SPATA2Q9UM82 520 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 V9GY05 133 aa13.69□□□□□ -0.22
SHOX2-202ENST00000425436 SPTAN1Q13813 2472 aaKnown RBP13.68□□□□□ -0.22
SHOX2-202ENST00000425436 TRBV5-7A0A0A0MS05 114 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 FUOMA2VDF0 154 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 PRSS44E7EML9 344 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 AIPO00170 330 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 MAGEB3O15480 346 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 RPS27P42677 84 aaKnown RBP13.68□□□□□ -0.22
SHOX2-202ENST00000425436 NR4A2P43354 598 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 SCAND1P57086 179 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 PITPNAQ00169 270 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 FMODQ06828 376 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 CAMK2DQ13557 499 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 IL18Q14116 193 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 TSPO2Q5TGU0 170 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 HACD4Q5VWC8 232 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 C19orf18Q8NEA5 215 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 OR2AJ1Q8NGZ0 328 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 TRMT10AQ8TBZ6 339 aaKnown RBP13.68□□□□□ -0.22
SHOX2-202ENST00000425436 ST7LQ8TDW4 575 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 NPDC1Q9NQX5 325 aaPredicted RBP13.68□□□□□ -0.22
SHOX2-202ENST00000425436 SLC7A10Q9NS82 523 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 CYB5R1Q9UHQ9 305 aa13.68□□□□□ -0.22
SHOX2-202ENST00000425436 USP9YO00507 2555 aaPredicted RBP13.68□□□□□ -0.22
SHOX2-202ENST00000425436 A0A1W2PPK0 400 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 IFITM5A6NNB3 132 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 PIN1P1O15428 100 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 MPZL1O95297 269 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 ISG15P05161 165 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 CD2P06729 351 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 H2BFMP0C1H6 154 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 SLC2A2P11168 524 aaPredicted RBP13.67□□□□□ -0.22
SHOX2-202ENST00000425436 MMP16P51512 607 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 ZNF133P52736 654 aaPredicted RBP13.67□□□□□ -0.22
SHOX2-202ENST00000425436 FOXG1P55316 489 aaPredicted RBP13.67□□□□□ -0.22
SHOX2-202ENST00000425436 OR10A3P58181 314 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 FAPQ12884 760 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 ASAH1Q13510 395 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 TSC22D1Q15714 1073 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 WDR38Q5JTN6 314 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 FBXW9Q5XUX1 488 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 TRIQKQ629K1 86 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 KLHL24Q6TFL4 600 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 BEND4Q6ZU67 534 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.67□□□□□ -0.22
SHOX2-202ENST00000425436 CATSPERDQ86XM0 798 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 PRSS35Q8N3Z0 413 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 Q8N402 240 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 SAMD12Q8N8I0 201 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 HSD17B8Q92506 261 aa13.67□□□□□ -0.22
SHOX2-202ENST00000425436 RGP1Q92546 391 aaPredicted RBP13.67□□□□□ -0.22
SHOX2-202ENST00000425436 RNASE6Q93091 150 aaKnown RBP13.67□□□□□ -0.22
SHOX2-202ENST00000425436 MCHR2Q969V1 340 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms