RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 POFUT1Q9H488 388 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 LOC100509620A0A075B734 347 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 A0A1W2PPL8 197 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 OR2M5A3KFT3 312 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 TMEM235A6NFC5 223 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 VSTM2BA6NLU5 285 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 F5H5P2 479 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 AMY2AP04746 511 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 ZNF250P15622 560 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 C4BPBP20851 252 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 ACTBP60709 375 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 ACTG1P63261 375 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 CLLU1Q5K131 121 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 SFRP5Q5T4F7 317 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 B3GNTL1Q67FW5 361 aaPredicted RBP9.5□□□□□ -0.89
CUX1-205ENST00000425244 FAM166AQ6J272 317 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 MRPL14Q6P1L8 145 aaKnown RBP9.5□□□□□ -0.89
CUX1-205ENST00000425244 TIPARPQ7Z3E1 657 aaKnown RBP9.5□□□□□ -0.89
CUX1-205ENST00000425244 ADGRE4PQ86SQ3 457 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 MISPQ8IVT2 679 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 GALNT16Q8N428 558 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 OR6M1Q8NGM8 313 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 ST7LQ8TDW4 575 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 ST8SIA1Q92185 356 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 FGGYQ96C11 551 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 CHST11Q9NPF2 352 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 G6PC2Q9NQR9 355 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 ZNF224Q9NZL3 707 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 PADI1Q9ULC6 663 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 POLR1DQ9Y2S0 133 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 ZNF175Q9Y473 711 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 DMXL2Q8TDJ6 3036 aa9.5□□□□□ -0.89
CUX1-205ENST00000425244 SDK2Q58EX2 2172 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 C9orf172C9J069 976 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 PDGFAP04085 211 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 LPLP06858 475 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 CELA2AP08217 269 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 LIPCP11150 499 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 ZNF41P51814 821 aaPredicted RBP9.49□□□□□ -0.89
CUX1-205ENST00000425244 PMPCAQ10713 525 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 NKPD1Q17RQ9 610 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 C3P1Q6ZMU1 363 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 CPEB2Q7Z5Q1 589 aaKnown RBP9.49□□□□□ -0.89
CUX1-205ENST00000425244 GPAT4Q86UL3 456 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 OR2AK2Q8NG84 335 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 GPX8Q8TED1 209 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 DDIT4LQ96D03 193 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 GSX2Q9BZM3 304 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 SEC61A2Q9H9S3 476 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 ZC4H2Q9NQZ6 224 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 PPP4R1LQ9P1A2 415 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 OPN4Q9UHM6 478 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 POM121CA8CG34 1229 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 B4E171 279 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 MCRIP1C9JLW8 97 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 TSPAN4O14817 238 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 OR2A4O95047 310 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 TNFSF15O95150 251 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 CYB5AP00167 134 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 FTH1P19P0C7X4 201 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 IGFBP3P17936 291 aaPredicted RBP9.49□□□□□ -0.89
CUX1-205ENST00000425244 POU3F2P20265 443 aaPredicted RBP9.49□□□□□ -0.89
CUX1-205ENST00000425244 ACHEP22303 614 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 OTX2P32243 289 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 TSPAN7P41732 249 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 TAS2R19P59542 299 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 SEC61A1P61619 476 aaKnown RBP9.49□□□□□ -0.89
CUX1-205ENST00000425244 S100A12P80511 92 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 INPP5JQ15735 1006 aaPredicted RBP9.49□□□□□ -0.89
CUX1-205ENST00000425244 TMEM164Q5U3C3 297 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 CARD17Q5XLA6 110 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 C5orf46Q6UWT4 87 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 COMMD2Q86X83 199 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 CHST4Q8NCG5 386 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 OR4S1Q8NGB4 309 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 OR4D6Q8NGJ1 314 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 MFSD8Q8NHS3 518 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 C11orf40Q8WZ69 217 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 CMBLQ96DG6 245 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 OR2A7Q96R45 310 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 TAAR9Q96RI9 348 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 KCNK17Q96T54 332 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 ARL6Q9H0F7 186 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 METTL7AQ9H8H3 244 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 SLC17A5Q9NRA2 495 aa9.49□□□□□ -0.89
CUX1-205ENST00000425244 COL27A1Q8IZC6 1860 aaPredicted RBP9.49□□□□□ -0.89
CUX1-205ENST00000425244 KLF7O75840 302 aaPredicted RBP9.48□□□□□ -0.89
CUX1-205ENST00000425244 UMODP07911 640 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 APOBEC1P41238 236 aaKnown RBP9.48□□□□□ -0.89
CUX1-205ENST00000425244 MECP2P51608 486 aaKnown RBP9.48□□□□□ -0.89
CUX1-205ENST00000425244 FOXK1P85037 733 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 KLHL24Q6TFL4 600 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 ALKAL2Q6UX46 152 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 C17orf107Q6ZR85 190 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 OR10G3Q8NGC4 313 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 C1QTNF6Q9BXI9 259 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 POTEKPQ9BYX7 375 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 RDH8Q9NYR8 311 aa9.48□□□□□ -0.89
CUX1-205ENST00000425244 TMEM82A0PJX8 343 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms