RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 LUZP2Q86TE4 346 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 TPRA1Q86W33 373 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 GID4Q8IVV7 300 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 MS4A15Q8N5U1 240 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 TRAM1L1Q8N609 369 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 LRRC17Q8N6Y2 441 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 SYT14Q8NB59 555 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 OR2T4Q8NH00 348 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 ITFG1Q8TB96 612 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 UBA3Q8TBC4 463 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 RDH11Q8TC12 318 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 C1orf54Q8WWF1 131 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 HGDQ93099 445 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 TMBIM1Q969X1 311 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 RCN3Q96D15 328 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 CXorf58Q96LI9 332 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 MBOAT7Q96N66 472 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 NRTNQ99748 197 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 TCEAL7Q9BRU2 100 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 SLC26A1Q9H2B4 701 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 OR51V1Q9H2C8 321 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 FAM96AQ9H5X1 160 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 RNF122Q9H9V4 155 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 ESM1Q9NQ30 184 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 NANSQ9NR45 359 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 FAM49BQ9NUQ9 324 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 SMPD3Q9NY59 655 aaPredicted RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 PTTG3PQ9NZH4 202 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 DHCR7Q9UBM7 475 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 SPASTQ9UBP0 616 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 METTL1Q9UBP6 276 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 SEC14L3Q9UDX4 400 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 MARCOQ9UEW3 520 aaPredicted RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 SLC2A6Q9UGQ3 507 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 V9GYH0 126 aa2.4□□□□□ -2.03
LINC01040-201ENST00000425048 BAZ2BQ9UIF8 2168 aaKnown RBP2.4□□□□□ -2.03
LINC01040-201ENST00000425048 SHANK3Q9BYB0 1731 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 PAPPAQ13219 1627 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 A0A075B6Q4 140 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 TRBV6-6A0A0A6YYG2 114 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.39□□□□□ -2.03
LINC01040-201ENST00000425048 PNMA8CA0A1B0GUJ8 204 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.39□□□□□ -2.03
LINC01040-201ENST00000425048 A0A1W2PPE3 182 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 METTL21EPA6NDL7 271 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 EFCAB9A8MZ26 197 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 G3V3Q6 166 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 MKRN2OSH3BPM6 223 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 K7ERQ8 282 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 AIPO00170 330 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 KCNK1O00180 336 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 DFFAO00273 331 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 EI24O14681 340 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 PDCD5O14737 125 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 MYL12BO14950 172 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 PLA2G10O15496 165 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 FABP7O15540 132 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 DLEU1O43261 78 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 RAD1O60671 282 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 DPM1O60762 260 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 CTNSO60931 367 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 BANF1O75531 89 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 IGHV2-5P01817 119 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 HLA-DQB1P01920 261 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 RLN1P04808 185 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 CRYBA1P05813 215 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 CHRNGP07510 517 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 GUSBP08236 651 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 FGF4P08620 206 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 UCHL3P15374 230 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 MYL12AP19105 171 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 PRPS1L1P21108 318 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 OR1E1P30953 314 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 RFC2P35250 354 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 SOAT1P35610 550 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 TAGLN2P37802 199 aaKnown RBP2.39□□□□□ -2.03
LINC01040-201ENST00000425048 MAP3K8P41279 467 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 MAP2K4P45985 399 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 CDKN1BP46527 198 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 RPS9P46781 194 aaKnown RBP2.39□□□□□ -2.03
LINC01040-201ENST00000425048 OMPP47874 163 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 HTR5AP47898 357 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 CSNK1DP48730 415 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 ATXN3P54252 364 aaPredicted RBP2.39□□□□□ -2.03
LINC01040-201ENST00000425048 PSME3P61289 254 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 TNFRSF9Q07011 255 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 BCL2L1Q07817 233 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 SIGLEC14Q08ET2 396 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 C17orf67Q0P5P2 114 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 SPP2Q13103 211 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 RPA4Q13156 261 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 PDE7AQ13946 482 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 GK2Q14410 553 aaPredicted RBP2.39□□□□□ -2.03
LINC01040-201ENST00000425048 PRPSAP1Q14558 356 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 SMCO1Q147U7 214 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 PTGES3Q15185 160 aaKnown RBP2.39□□□□□ -2.03
LINC01040-201ENST00000425048 TOMM34Q15785 309 aaPredicted RBP2.39□□□□□ -2.03
LINC01040-201ENST00000425048 GUCA2BQ16661 112 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 TATDN3Q17R31 274 aa2.39□□□□□ -2.03
LINC01040-201ENST00000425048 AVPI1Q5T686 147 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms