RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 MGAT4AQ9UM21 535 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.69□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF732B4DXR9 585 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 HS3ST1O14792 307 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 UBL3O95164 117 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 CYC1P08574 325 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 SMIM18P0DKX4 95 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 CCL2P13500 99 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF121P58317 390 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-201ENST00000421999 Q6ZTK2 550 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 ADGRG3Q86Y34 549 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 C17orf47Q8NEP4 570 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 NELFAQ9H3P2 528 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 EHFQ9NZC4 300 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 TUBAL3A6NHL2 446 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 H7C2Y5 167 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 TOR1AO14656 332 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF780AO75290 641 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-201ENST00000421999 TP53P04637 393 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-201ENST00000421999 STOMP27105 288 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 HES1Q14469 280 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 EIF2S3LQ2VIR3 472 aaKnown RBP8.69□□□□□ -1.02
CMSS1-201ENST00000421999 PLEKHN1Q494U1 663 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-201ENST00000421999 PABPC1L2AQ5JQF8 200 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 CFAP77Q6ZQR2 320 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 SYT9Q86SS6 491 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 CCDC71LQ8N9Z2 235 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 OR1F12Q8NHA8 337 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 MCHR2Q969V1 340 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 APOBEC3DQ96AK3 386 aaPredicted RBP8.69□□□□□ -1.02
CMSS1-201ENST00000421999 SIAEQ9HAT2 523 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 STEAP1Q9UHE8 339 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 RAXQ9Y2V3 346 aa8.69□□□□□ -1.02
CMSS1-201ENST00000421999 C9orf172C9J069 976 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 DEGS1O15121 323 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 PRKACAP17612 351 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 EIF5AP63241 154 aaKnown RBP8.68□□□□□ -1.02
CMSS1-201ENST00000421999 CDK5Q00535 292 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 PPP1R32Q7Z5V6 425 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 BTLAQ7Z6A9 289 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 CLDN22Q8N7P3 220 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF709Q8N972 641 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 OR8H1Q8NGG4 311 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 LGALS14Q8TCE9 139 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 SLC7A6Q92536 515 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 PLCXD1Q9NUJ7 323 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 TXNL4BQ9NX01 149 aaKnown RBP8.68□□□□□ -1.02
CMSS1-201ENST00000421999 SLCO1C1Q9NYB5 712 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 OR14I1A6ND48 311 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 ATG12O94817 140 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 GPANK1O95872 356 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 IL1AP01583 271 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 SCG5P05408 212 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 PPP5CP53041 499 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 CLDN20P56880 219 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 BDH1Q02338 343 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 SLC17A1Q14916 467 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 C12orf73Q69YU5 71 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 OR2T2Q6IF00 324 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 NLRC3Q7RTR2 1065 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 OR6M1Q8NGM8 313 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 OR13F1Q8NGS4 319 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 ST7LQ8TDW4 575 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 FAM234AQ9H0X4 552 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 MOB1AQ9H8S9 216 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 GFOD1Q9NXC2 390 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 TAS2R4Q9NYW5 299 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 LAMA2P24043 3122 aaKnown RBP8.68□□□□□ -1.02
CMSS1-201ENST00000421999 ARPC3O15145 178 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 CD3EP07766 207 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 H2AFB2P0C5Z0 115 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 FAHP16930 419 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 GRK1Q15835 563 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 SOWAHCQ53LP3 525 aaPredicted RBP8.68□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF774Q6NX45 483 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 MRPL14Q6P1L8 145 aaKnown RBP8.68□□□□□ -1.02
CMSS1-201ENST00000421999 WDR88Q6ZMY6 472 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 SLC25A26Q70HW3 274 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 COMTD1Q86VU5 262 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 CXorf67Q86X51 503 aaPredicted RBP8.68□□□□□ -1.02
CMSS1-201ENST00000421999 COQ8AQ8NI60 647 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 CENPOQ9BU64 300 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 COL25A1Q9BXS0 654 aaPredicted RBP8.68□□□□□ -1.02
CMSS1-201ENST00000421999 PBOV1Q9GZY1 135 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 ESRP2Q9H6T0 727 aaKnown RBP8.68□□□□□ -1.02
CMSS1-201ENST00000421999 TOXO94900 526 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 CTLA4P16410 223 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 S100A1P23297 94 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 HAAOP46952 286 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 CRYBA2P53672 197 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 GNB2P62879 340 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 PCK2Q16822 640 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 LSRQ86X29 649 aaPredicted RBP8.68□□□□□ -1.02
CMSS1-201ENST00000421999 ANKRD13BQ86YJ7 626 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 ZNF695Q8IW36 515 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 SGPP2Q8IWX5 399 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 NKAIN3Q8N8D7 197 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 SLC30A7Q8NEW0 376 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 OR2Z1Q8NG97 314 aa8.68□□□□□ -1.02
CMSS1-201ENST00000421999 FAM3DQ96BQ1 224 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms