RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 ACSM4P0C7M7 580 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 PSKH1P11801 424 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 TUBG1P23258 451 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 CENPAP49450 140 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 HIST1H3AP68431 136 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 ZNF181Q2M3W8 571 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 KRTAP27-1Q3LI81 207 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 ZNF362Q5T0B9 420 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-203ENST00000420503 HIST2H3PS2Q5TEC6 136 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 ZNF620Q6ZNG0 422 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 COLCA1Q6ZS62 124 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 MBOAT2Q6ZWT7 520 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 HIST2H3AQ71DI3 136 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 OR2T12Q8NG77 320 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 ACOT11Q8WXI4 607 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-203ENST00000420503 UBE2FQ969M7 185 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 APOBEC3DQ96AK3 386 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-203ENST00000420503 WDFY2Q96P53 400 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 FN3KQ9H479 309 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 NOX4Q9NPH5 578 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 TUBG2Q9NRH3 451 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 TMEM100Q9NV29 134 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 VSX1Q9NZR4 365 aaPredicted RBP10.64□□□□□ -0.71
LINC00339-203ENST00000420503 DNAJB11Q9UBS4 358 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 SIGLEC7Q9Y286 467 aa10.64□□□□□ -0.71
LINC00339-203ENST00000420503 IGLV1-36A0A0B4J1U3 117 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 A0A1B0GUS0 222 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 SLC22A31A6NKX4 558 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 LRRC30A6NM36 301 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 F5H5K5 113 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 G3V4G9 280 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 IFNL4K9M1U5 179 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 OR10H3O60404 316 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 SNX3O60493 162 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 PTP4A3O75365 173 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 CLPXO76031 633 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 PPP1R3DO95685 299 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 ZNF682O95780 498 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 GYPAP02724 150 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 IFNW1P05000 195 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 CA6P23280 308 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 RPS27P42677 84 aaKnown RBP10.63□□□□□ -0.71
LINC00339-203ENST00000420503 GATA4P43694 442 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 LSM6P62312 80 aaKnown RBP10.63□□□□□ -0.71
LINC00339-203ENST00000420503 ARF6P62330 175 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 GNGT1P63211 74 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 KLF10Q13118 480 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 SEC23BQ15437 767 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 TAF9Q16594 264 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 ERICH5Q6P6B1 374 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 TMPRSS11FQ6ZWK6 438 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 PNKDQ8N490 385 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 FAM156AQ8NDB6 213 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 Q8TCH9 128 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 SLC7A13Q8TCU3 470 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 SLCO4A1Q96BD0 722 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 SEH1LQ96EE3 360 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 HSH2DQ96JZ2 352 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 NMNAT1Q9HAN9 279 aaPredicted RBP10.63□□□□□ -0.71
LINC00339-203ENST00000420503 PNRC2Q9NPJ4 139 aaKnown RBP10.63□□□□□ -0.71
LINC00339-203ENST00000420503 NRIP3Q9NQ35 241 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 SAR1AQ9NR31 198 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 ACOXLQ9NUZ1 547 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 PLXNB1O43157 2135 aa10.63□□□□□ -0.71
LINC00339-203ENST00000420503 TRBV4-1A0A0J9YWV2 114 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 A0A1W2PRD5 423 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 A0A1W2PRF3 423 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 A0A1W2PRM7 423 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 ELOVL7A1L3X0 281 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 P2RY10O00398 339 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 TIMM23O14925 209 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 ADAM20O43506 726 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 DIRAS1O95057 198 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 IFNA14P01570 189 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 SDHAP31040 664 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 CD200P41217 278 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 IER3P46695 156 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 RGS6P49758 472 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 KCNMB1Q16558 191 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 SNAI3Q3KNW1 292 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 SLC18B1Q6NT16 456 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 LYPD4Q6UWN0 246 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 C1orf87Q8N0U7 546 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 OR6V1Q8N148 313 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 TMEM86BQ8N661 226 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 OR2AE1Q8NHA4 323 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 SSMEM1Q8WWF3 244 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 GATAD2BQ8WXI9 593 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 RCN3Q96D15 328 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 RSRC1Q96IZ7 334 aaKnown RBP10.62□□□□□ -0.71
LINC00339-203ENST00000420503 FAM71F1Q96KD3 344 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-203ENST00000420503 COG8Q96MW5 612 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 COQ7Q99807 217 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 ELAC2Q9BQ52 826 aaKnown RBP10.62□□□□□ -0.71
LINC00339-203ENST00000420503 WACQ9BTA9 647 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 PPP1R3EQ9H7J1 279 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 TCF7L1Q9HCS4 588 aa10.62□□□□□ -0.71
LINC00339-203ENST00000420503 MRGBPQ9NV56 204 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms