RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 MMADHCQ9H3L0 296 aaPredicted RBP10.79□□□□□ -0.68
HMGN1P4-201ENST00000419500 ZNF665Q9H7R5 613 aa10.79□□□□□ -0.68
HMGN1P4-201ENST00000419500 PNRC2Q9NPJ4 139 aaKnown RBP10.79□□□□□ -0.68
HMGN1P4-201ENST00000419500 DDX28Q9NUL7 540 aaKnown RBP10.79□□□□□ -0.68
HMGN1P4-201ENST00000419500 IL19Q9UHD0 177 aa10.79□□□□□ -0.68
HMGN1P4-201ENST00000419500 FBN1P35555 2871 aaKnown RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 ZNF878C9JN71 531 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 PRR23D1E9PI22 279 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 ZNF593O00488 134 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 TIPRLO75663 272 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 MSMBP08118 114 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 PRR23D2P0DMB1 279 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 OSMP13725 252 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 ANPEPP15144 967 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 PRKACGP22612 351 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 DVL1P1P54792 670 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 GK2Q14410 553 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 GINS1Q14691 196 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 RSPO1Q2MKA7 263 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 KRTAP27-1Q3LI81 207 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 C1orf146Q5VVC0 180 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 SHQ1Q6PI26 577 aaKnown RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 DRAM2Q6UX65 266 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 Q6ZR03 302 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 COLCA1Q6ZS62 124 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 PGAP1Q75T13 922 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 MRPL21Q7Z2W9 205 aaKnown RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 ERI1Q8IV48 349 aaKnown RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 OR10S1Q8NGN2 331 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 OR6N2Q8NGY6 317 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 OR13G1Q8NGZ3 307 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 DNAJC9Q8WXX5 260 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 PLEKHA8Q96JA3 519 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 INTS14Q96SY0 518 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 MED20Q9H944 212 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 CENPMQ9NSP4 180 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 TMEFF2Q9UIK5 374 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 PPP1R3CQ9UQK1 317 aa10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.78□□□□□ -0.68
HMGN1P4-201ENST00000419500 TANC2Q9HCD6 1990 aa10.77□□□□□ -0.68
HMGN1P4-201ENST00000419500 IQCF6A8MYZ5 107 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 FAM157AC9JC47 383 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 CIB2O75838 187 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 HMGN1P05114 100 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 PSKH1P11801 424 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 HSD11B1P28845 292 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 GSTT1P30711 240 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 SRP14P37108 136 aaKnown RBP10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 SLC15A1P46059 708 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 SRP9P49458 86 aaKnown RBP10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 LMO4P61968 165 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 EIF2B1Q14232 305 aaKnown RBP10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 ACSM5Q6NUN0 579 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 PLBD1Q6P4A8 553 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 ZNF771Q7L3S4 317 aaPredicted RBP10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 NAA40Q86UY6 237 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 ITLN1Q8WWA0 313 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 TMEM186Q96B77 213 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 SLCO4A1Q96BD0 722 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 NRBF2Q96F24 287 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 OR51V1Q9H2C8 321 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 TMEM106BQ9NUM4 274 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 HIF1ANQ9NWT6 349 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 UBAP1Q9NZ09 502 aa10.77□□□□□ -0.69
HMGN1P4-201ENST00000419500 ATRQ13535 2644 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 GLCEO94923 617 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 OTX1P32242 354 aaPredicted RBP10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 RAD23AP54725 363 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 GRB2P62993 217 aaKnown RBP10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 PCK2Q16822 640 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 SNAI3Q3KNW1 292 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 KLHL12Q53G59 568 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 SPRNQ5BIV9 151 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 TEX30Q5JUR7 227 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 LINC01590Q5TEZ4 76 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 SPATC1Q76KD6 591 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 DPY19L4Q7Z388 723 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 ZNF283Q8N7M2 679 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 ST7LQ8TDW4 575 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 SPRYD4Q8WW59 207 aaPredicted RBP10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 KCNJ15Q99712 375 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 SLC30A2Q9BRI3 323 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 PAPOLBQ9NRJ5 636 aaKnown RBP10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 TMEM100Q9NV29 134 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 NOP16Q9Y3C1 178 aaKnown RBP10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 NPTNQ9Y639 398 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 MALRD1Q5VYJ5 2156 aa10.76□□□□□ -0.69
HMGN1P4-201ENST00000419500 TRAV20A0A0B4J274 112 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 IFNL4K9M1U5 179 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 MLNRO43193 412 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 PRODHO43272 600 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 IGHV2-5P01817 119 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 APOC1P02654 83 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 SLC2A1P11166 492 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 CX3CR1P49238 355 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 PRKXP51817 358 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 RPS7P62081 194 aaKnown RBP10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 BTG1P62324 171 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 CDK5Q00535 292 aa10.75□□□□□ -0.69
HMGN1P4-201ENST00000419500 ATP6AP1Q15904 470 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms