RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	OR51F2	Q8NH61	342 aa		11.93	□□□□□ -0.5
BDNF-208	ENST00000418212	FBXW5	Q969U6	566 aa		11.93	□□□□□ -0.5
BDNF-208	ENST00000418212	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
BDNF-208	ENST00000418212	CEBPZOS	A8MTT3	80 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	ANGPTL7	O43827	346 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	NAGA	P17050	411 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	FABP6	P51161	128 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	ARF1	P84077	181 aa	Known RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	CDK5	Q00535	292 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	EBP	Q15125	230 aa	Known RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	MRM1	Q6IN84	353 aa	Known RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	RNF165	Q6ZSG1	346 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	NAXD	Q8IW45	347 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	OR51H1	Q8NH63	302 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	FCRL1	Q96LA6	429 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	ZFP57	Q9NU63	452 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	KLF13	Q9Y2Y9	288 aa	Predicted RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	TNS1	Q9HBL0	1735 aa	Known RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212		E9PI62	339 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	PHF1	O43189	567 aa	Predicted RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	POU3F3	P20264	500 aa	Predicted RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	NFYA	P23511	347 aa	Predicted RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	PTAFR	P25105	342 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	CDKN2A	P42771	156 aa	Known RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	RBPJ	Q06330	500 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	GCNT2	Q8N0V5	402 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	ZNF321P	Q8N8H1	164 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	ARL11	Q969Q4	196 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	SGK3	Q96BR1	496 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	S1PR5	Q9H228	398 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	IFT22	Q9H7X7	185 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	GCM1	Q9NP62	436 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	EXO1	Q9UQ84	846 aa	Known RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	COLQ	Q9Y215	455 aa	Predicted RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	BRCA2	P51587	3418 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	DNAH12	Q6ZR08	3092 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	CHRM2	P08172	466 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	EPX	P11678	715 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	DUSP1	P28562	367 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	RFX2	P48378	723 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	PAN3	Q58A45	887 aa	Known RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	C17orf107	Q6ZR85	190 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	ZNF687	Q8N1G0	1237 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	ZNF610	Q8N9Z0	462 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	C17orf47	Q8NEP4	570 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	OR5M9	Q8NGP3	310 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	JAM3	Q9BX67	310 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	MN1	Q10571	1320 aa	Predicted RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	CACNA1A	O00555	2505 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	CENPVL1	A0A0U1RR11	272 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212		K7EPK0	472 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	ZNF254	O75437	659 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	IGHA2	P01877	340 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	CD3D	P04234	171 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	IGHV4-34	P06331	123 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	TPT1	P13693	172 aa	Known RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	ZNF121	P58317	390 aa	Predicted RBP	11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	CLINT1	Q14677	625 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	ETFDH	Q16134	617 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	PRSS42	Q7Z5A4	293 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	FAM71E2	Q8N5Q1	922 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	OCIAD1	Q9NX40	245 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	GFOD1	Q9NXC2	390 aa		11.92	□□□□□ -0.5
BDNF-208	ENST00000418212	MEX3A	A1L020	520 aa	Known RBP	11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	RER1	O15258	196 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	ZNF728	P0DKX0	622 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	SSX1	Q16384	188 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	SPATA46	Q5T0L3	261 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	ZBTB37	Q5TC79	503 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	TMEM217	Q8N7C4	229 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	HSD17B11	Q8NBQ5	300 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	TRIB1	Q96RU8	372 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	C12orf57	Q99622	126 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	OCSTAMP	Q9BR26	566 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	TMEM43	Q9BTV4	400 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	PBOV1	Q9GZY1	135 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	RNF32	Q9H0A6	362 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	PCED1A	Q9H1Q7	454 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	SHANK1	Q9Y566	2161 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	LILRB5	O75023	590 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	ATG12	O94817	140 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	PATE4	P0C8F1	98 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	ZNF14	P17017	642 aa	Predicted RBP	11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	FKBP2	P26885	142 aa	Known RBP	11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	PEBP1	P30086	187 aa	Known RBP	11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	KIR2DL3	P43628	341 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	ZNF136	P52737	540 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	BAMBI	Q13145	260 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	SHB	Q15464	509 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	AANAT	Q16613	207 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	ZNF681	Q96N22	645 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	HDGFL3	Q9Y3E1	203 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	TIMM10B	Q9Y5J6	103 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	SBF2	Q86WG5	1849 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	SPG11	Q96JI7	2443 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	DOCK7	Q96N67	2140 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	MPZL1	O95297	269 aa		11.91	□□□□□ -0.5
BDNF-208	ENST00000418212	ATF1	P18846	271 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms