RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RPS27P42677 84 aaKnown RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 TAF1CQ15572 869 aaPredicted RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 HIST2H3PS2Q5TEC6 136 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 DPPA2Q7Z7J5 298 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF615Q8N8J6 731 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 OR5R1Q8NH85 324 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 DOK4Q8TEW6 326 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 TMEM230Q96A57 120 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 GNRHR2Q96P88 292 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 LMAN2LQ9H0V9 348 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 SMOC1Q9H4F8 434 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 SRA1Q9HD15 236 aaKnown RBP7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 TAS2R4Q9NYW5 299 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 DHDHQ9UQ10 334 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 MMP24Q9Y5R2 645 aa7.19□□□□□ -1.26
HMGXB4-202ENST00000418170 ADAM10O14672 748 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF354AO60765 605 aaPredicted RBP7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 SFTPBP07988 381 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 CPMP14384 443 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 METAP1P53582 386 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 OR8G1Q15617 311 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 MESTQ5EB52 335 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 GFI1BQ5VTD9 330 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 CLEC18BQ6UXF7 455 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 RAB24Q969Q5 203 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 AMELYQ99218 206 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 PARP12Q9H0J9 701 aaKnown RBP7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 PTGES2Q9H7Z7 377 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 GTF2A1LQ9UNN4 478 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 WASF3Q9UPY6 502 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 A0A087WUJ7 227 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 NME2P1O60361 137 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 NUBP1P53384 320 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC9A3R2Q15599 337 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 FCRL6Q6DN72 434 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 MED25Q71SY5 747 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 TAF8Q7Z7C8 310 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 NPAS4Q8IUM7 802 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 FAM219AQ8IW50 185 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 ASB5Q8WWX0 329 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 SRMSQ9H3Y6 488 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 C5orf66Q9H5L9 145 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 FBXL17Q9UF56 701 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 KIF26BQ2KJY2 2108 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 A0A087WV62 115 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 DCDC2BA2VCK2 349 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 CEACAM18A8MTB9 384 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 PTBP3O95758 552 aaKnown RBP7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 GABRA3P34903 492 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 S100A10P60903 97 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 MLF2Q15773 248 aaPredicted RBP7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 UBE2V2Q15819 145 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF674Q2M3X9 581 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 OPN5Q6U736 354 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 LRRC69Q6ZNQ3 347 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 KDM8Q8N371 416 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 MFSD9Q8NBP5 474 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 TERB2Q8NHR7 220 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 CA5BP1Q8WTZ4 195 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 SUCNR1Q9BXA5 334 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC22A13Q9Y226 551 aa7.18□□□□□ -1.26
HMGXB4-202ENST00000418170 HEATR5AQ86XA9 2040 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 A8MWP6 167 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 DANCRP0C864 163 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 RNH1P13489 461 aaKnown RBP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 FCARP24071 287 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 LMO1P25800 156 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 RPL12P30050 165 aaKnown RBP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 CTNNB1P35222 781 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 IGFALSP35858 605 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 SUPT4H1P63272 117 aaKnown RBP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 NHLH2Q02577 135 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF616Q08AN1 781 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 USF2Q15853 346 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 ANKRD55Q3KP44 614 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 C1orf100Q5SVJ3 147 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 DTWD2Q8NBA8 298 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 OR2L3Q8NG85 312 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 OR10AD1Q8NGE0 317 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 OR2L8Q8NGY9 312 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 NKD1Q969G9 470 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 GAL3ST3Q96A11 431 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 COX14Q96I36 57 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 INTS14Q96SY0 518 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 CNTNAP3Q9BZ76 1288 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 METTL8Q9H825 291 aaKnown RBP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 PRR13Q9NZ81 148 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 GPR132Q9UNW8 380 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 KCNIP3Q9Y2W7 256 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 MEGF11A6BM72 1044 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF264O43296 627 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 NKX6-1P78426 367 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 SPEM2Q0P670 501 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 ELOBQ15370 118 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 PDZD11Q5EBL8 140 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 TCEAL8Q8IYN2 117 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 JAGN1Q8N5M9 183 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 AVL9Q8NBF6 648 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 OR51A2Q8NGJ7 313 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 OR9A4Q8NGU2 314 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms