RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 UNQ6126/PRO20091Q6UXV3 157 aa12.88□□□□□ -0.35
HDAC9-208ENST00000417496 TMPRSS9Q7Z410 1059 aa12.88□□□□□ -0.35
HDAC9-208ENST00000417496 COMMD2Q86X83 199 aa12.88□□□□□ -0.35
HDAC9-208ENST00000417496 TMEM104Q8NE00 496 aa12.88□□□□□ -0.35
HDAC9-208ENST00000417496 ZC3H10Q96K80 434 aaKnown RBP12.88□□□□□ -0.35
HDAC9-208ENST00000417496 GPN3Q9UHW5 284 aaPredicted RBP12.88□□□□□ -0.35
HDAC9-208ENST00000417496 RAB22AQ9UL26 194 aa12.88□□□□□ -0.35
HDAC9-208ENST00000417496 PRELID1Q9Y255 219 aa12.88□□□□□ -0.35
HDAC9-208ENST00000417496 A0A1W2PP11 408 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 RNF222A6NCQ9 220 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 A6NIZ1 184 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 DISC1C4P0D8 188 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 UBCP0CG48 685 aaKnown RBP12.87□□□□□ -0.35
HDAC9-208ENST00000417496 MGMTP16455 207 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 DAP3P51398 398 aaKnown RBP12.87□□□□□ -0.35
HDAC9-208ENST00000417496 CLDN6P56747 220 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 NXPH1P58417 271 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 RAP1BP61224 184 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 RAP1AP62834 184 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 OR1M1Q8NGA1 313 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 MFSD8Q8NHS3 518 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 LHFPL5Q8TAF8 219 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 CHST11Q9NPF2 352 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 SERINC1Q9NRX5 453 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 PRR13Q9NZ81 148 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 CYB5R1Q9UHQ9 305 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 TNFSF18Q9UNG2 199 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 CELSR3Q9NYQ7 3312 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 C13orf42A0A1B0GVH6 325 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 A0A1W2PNR3 127 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 C9orf170A2RU37 121 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 NAGAP17050 411 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 KLK2P20151 261 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 BCKDHBP21953 392 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 STARP49675 285 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 QRFPP83859 136 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 C17orf67Q0P5P2 114 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 BAMBIQ13145 260 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 AWAT2Q6E213 333 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 DNM1P34Q6PK57 102 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 HSD17B13Q7Z5P4 300 aaPredicted RBP12.87□□□□□ -0.35
HDAC9-208ENST00000417496 LYG2Q86SG7 212 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 SLC25A42Q86VD7 318 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 ZNF101Q8IZC7 436 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 NKAIN3Q8N8D7 197 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 OR10H5Q8NGA6 315 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 BANF2Q9H503 90 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 TAS2R3Q9NYW6 316 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 COMMD9Q9P000 198 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 ZNF319Q9P2F9 582 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 B3GAT1Q9P2W7 334 aa12.87□□□□□ -0.35
HDAC9-208ENST00000417496 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 ANKUB1A6NFN9 424 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 ZNF814B7Z6K7 855 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 DUX1O43812 170 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 SSX5O60225 188 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 DLSTP36957 453 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 MYBPHQ13203 477 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 KLHL24Q6TFL4 600 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 TFAP2EQ6VUC0 442 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 PRRT1Q99946 306 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 RASL12Q9NYN1 266 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 KLRF1Q9NZS2 232 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 MUC3AQ02505 3323 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 KANTRA0A1W2PQU2 76 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 LIPT2A6NK58 231 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 TMEM200CA6NKL6 621 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 OR6C76A6NM76 312 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 PI3P19957 117 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 AGTR1P30556 359 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 ZNF93P35789 620 aaPredicted RBP12.86□□□□□ -0.35
HDAC9-208ENST00000417496 ZNF273Q14593 569 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 KCNRGQ8N5I3 272 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 MARCH1Q8TCQ1 289 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 IFT46Q9NQC8 304 aa12.86□□□□□ -0.35
HDAC9-208ENST00000417496 A0A0A6YYH2 397 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 A0A0D9SG52 128 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 A6NJ64 397 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 VSTM2BA6NLU5 285 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 RER1O15258 196 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 RAMP1O60894 148 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 GLULP15104 373 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 FOSL2P15408 326 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 APOBEC1P41238 236 aaKnown RBP12.85□□□□□ -0.35
HDAC9-208ENST00000417496 AKR1C2P52895 323 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 DEFA5Q01523 94 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 AKR1C1Q04828 323 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 ZP4Q12836 540 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 MEF2DQ14814 521 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 TMPPEQ6ZT21 453 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 ABHD12BQ7Z5M8 362 aaPredicted RBP12.85□□□□□ -0.35
HDAC9-208ENST00000417496 SLC22A24Q8N4F4 322 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 OR5D14Q8NGL3 314 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 ROBO4Q8WZ75 1007 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 NARS2Q96I59 477 aaKnown RBP12.85□□□□□ -0.35
HDAC9-208ENST00000417496 BARX1Q9HBU1 254 aaPredicted RBP12.85□□□□□ -0.35
HDAC9-208ENST00000417496 MBD2Q9UBB5 411 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 POLR1DQ9Y2S0 133 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 LHFPL6Q9Y693 200 aa12.85□□□□□ -0.35
HDAC9-208ENST00000417496 A0A0A6YYD4 124 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms