RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 LINC00346Q8IVM7 164 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 FAM86B1Q8N7N1 296 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 CELF2-AS1Q8N7Q2 184 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 OR11L1Q8NGX0 322 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 OR2AJ1Q8NGZ0 328 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 ERGIC1Q969X5 290 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 ATF6BQ99941 703 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 NUDT16L1Q9BRJ7 211 aaKnown RBP12.05□□□□□ -0.48
PAF1-202ENST00000416728 FUZQ9BT04 418 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 OR52D1Q9H346 318 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 SPAG4Q9NPE6 437 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 RPRD1BQ9NQG5 326 aaKnown RBP12.05□□□□□ -0.48
PAF1-202ENST00000416728 CLN8Q9UBY8 286 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 SOX21Q9Y651 276 aaPredicted RBP12.05□□□□□ -0.48
PAF1-202ENST00000416728 PHYHO14832 338 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 ARPC3O15145 178 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 GADD45GO95257 159 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 HLA-DQA2P01906 255 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 LCATP04180 440 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 HIST1H1CP16403 213 aaKnown RBP12.05□□□□□ -0.48
PAF1-202ENST00000416728 NOS3P29474 1203 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 SPIBQ01892 262 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 DBPQ10586 325 aaPredicted RBP12.05□□□□□ -0.48
PAF1-202ENST00000416728 DCDC5Q6ZRR9 648 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 OR4K13Q8NH42 304 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 Q8TCH9 128 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 CMTM5Q96DZ9 223 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 IFT27Q9BW83 186 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 ADA2Q9NZK5 511 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 V9GYQ6 96 aa12.05□□□□□ -0.48
PAF1-202ENST00000416728 MDFIC2A0A1B0GVS7 189 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 KCNAB3O43448 404 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 FAM20BO75063 409 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 CD200P41217 278 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 RAD23AP54725 363 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 TRAP1Q12931 704 aaKnown RBP12.04□□□□□ -0.48
PAF1-202ENST00000416728 MAB21L1Q13394 359 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 HSP90B2PQ58FF3 399 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 WDR25Q64LD2 544 aaPredicted RBP12.04□□□□□ -0.48
PAF1-202ENST00000416728 C16orf87Q6PH81 154 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 LYPD2Q6UXB3 125 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 PGAP1Q75T13 922 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 SPATC1Q76KD6 591 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 MRPL21Q7Z2W9 205 aaKnown RBP12.04□□□□□ -0.48
PAF1-202ENST00000416728 ZBTB46Q86UZ6 589 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 FITM2Q8N6M3 262 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 RNF148Q8N7C7 305 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 OR10S1Q8NGN2 331 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 SPRYD4Q8WW59 207 aaPredicted RBP12.04□□□□□ -0.48
PAF1-202ENST00000416728 ZDHHC16Q969W1 377 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 SLCO4A1Q96BD0 722 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 UFSP2Q9NUQ7 469 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 CYB5R1Q9UHQ9 305 aa12.04□□□□□ -0.48
PAF1-202ENST00000416728 NOP16Q9Y3C1 178 aaKnown RBP12.04□□□□□ -0.48
PAF1-202ENST00000416728 HOXA3O43365 443 aaPredicted RBP12.03□□□□□ -0.48
PAF1-202ENST00000416728 ENSAO43768 121 aaKnown RBP12.03□□□□□ -0.48
PAF1-202ENST00000416728 OR10H3O60404 316 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 GGT2P36268 569 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 IFNGR2P38484 337 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 TPTEP56180 551 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 FGF12P61328 243 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 OR8G1Q15617 311 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 CLEC12AQ5QGZ9 265 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 GPR157Q5UAW9 335 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 PRAMEF6Q5VXH4 476 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 BRD3OSQ6XYD6 125 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 NAA40Q86UY6 237 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 C19orf18Q8NEA5 215 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 SDR9C7Q8NEX9 313 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 TAF15Q92804 592 aaKnown RBP eCLIP12.03□□□□□ -0.48
PAF1-202ENST00000416728 SPTSSAQ969W0 71 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 TMIGD2Q96BF3 282 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 PYURFQ96I23 114 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 SLC22A4Q9H015 551 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 SLITRK2Q9H156 845 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 MMADHCQ9H3L0 296 aaPredicted RBP12.03□□□□□ -0.48
PAF1-202ENST00000416728 FN3KQ9H479 309 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 GORASP2Q9H8Y8 452 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 PNRC2Q9NPJ4 139 aaKnown RBP12.03□□□□□ -0.48
PAF1-202ENST00000416728 TMCC3Q9ULS5 477 aa12.03□□□□□ -0.48
PAF1-202ENST00000416728 OR6C68A6NDL8 312 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 C22orf46C9J442 243 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 M0R135 149 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 IDH3BO43837 385 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 ZNF823P16415 610 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 MDKP21741 143 aaPredicted RBP12.02□□□□□ -0.49
PAF1-202ENST00000416728 CA6P23280 308 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 PSMB10P40306 273 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 NPY4RP50391 375 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 BPIFB3P59826 476 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 MPPED2Q15777 294 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 KCNJ8Q15842 424 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 DEFB112Q30KQ8 113 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 TREML4Q6UXN2 200 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 ZNF841Q6ZN19 808 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 MCUR1Q96AQ8 359 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 ZNF799Q96GE5 643 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 TECTBQ96PL2 329 aa12.02□□□□□ -0.49
PAF1-202ENST00000416728 NSRP1Q9H0G5 558 aaKnown RBP12.02□□□□□ -0.49
PAF1-202ENST00000416728 FN3KRPQ9HA64 309 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms